Caldimonas thermodepolymerans: IS481_11785
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Entry
IS481_11785 CDS
T06911
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sthm03016
]
IS481_11785 (truA)
Enzymes [BR:
sthm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IS481_11785 (truA)
Transfer RNA biogenesis [BR:
sthm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IS481_11785 (truA)
Prokaryotic type
IS481_11785 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QPC30451
LinkDB
All DBs
Position
complement(2515313..2516095)
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AA seq
260 aa
AA seq
DB search
MRIALGITYRGTAYKGWQSQPGGGTVQDHLESALRRFAGQGVRTICAGRTDAGVHGLNQV
VHFDTELQREPFSWVRGTNTYLPADIAVQWCQPVPDHFHARNSALGRRYVYLLRESPVRP
ALETGFAGWVFRPLDVEAMRAAAAYLIGEHDFSAFRSSECQAKSPVKVLREITIRRQGAY
WRFEFEASAFLHHMVRNLMGCLVAVGAGNQRPEWVQEVLDSRDRRRAAPTFAPDGLYFVG
PRYDPAFGLPEVNAALDWLP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ttgaggatcgcgctcggcatcacctaccgggggaccgcctacaagggctggcagagccag
cccggcggcgggaccgtccaggaccacctcgaatccgccctgcgccgctttgccggccag
ggcgttcgtaccatttgcgccggccgcaccgatgccggcgtgcatggcctgaaccaggtc
gtgcacttcgacaccgaactgcagcgcgaaccgttctcctgggtgcgtggcaccaacacc
tacctgcctgcggacatcgcggtgcaatggtgccaaccggtgccggaccatttccacgcc
cgcaacagtgcgctgggacggcgctacgtctacctgctgcgggaatcgccggtgcggccg
gcactggagaccgggttcgcgggctgggtgttccggccgctggatgtcgaggcgatgcgc
gcggcggcggcctacctgatcggcgagcacgacttctcggcattccgctcgtcggaatgc
caggccaagtccccggtcaaggtcctgcgcgagatcacgatccgccggcagggggcatac
tggcggttcgagttcgaggcctcggccttcctgcaccacatggtgcgcaacctgatgggc
tgcctggtggcggtgggcgccggcaaccagcgaccggaatgggtgcaggaggtgctggac
agccgcgaccgtcgccgggcggcgccgaccttcgccccggatgggctgtatttcgtcggc
ccgcgctacgaccccgcctttggcctgcccgaagtcaacgctgccctggactggctaccc
tga
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