Caldimonas thermodepolymerans: IS481_11990
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Entry
IS481_11990 CDS
T06911
Name
(GenBank) toprim domain-containing protein
KO
K17680
twinkle mtDNA helicase [EC:
5.6.2.3
]
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sthm03029
]
IS481_11990
Enzymes [BR:
sthm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
IS481_11990
Mitochondrial biogenesis [BR:
sthm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
IS481_11990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helic-prim_T7_N
DnaB_C
Toprim_2
AAA_25
Toprim_3
ATPase
Toprim
Toprim_4
DUF7344
AAA_22
TFB6
Motif
Other DBs
NCBI-ProteinID:
QPC30490
LinkDB
All DBs
Position
2557697..2559355
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AA seq
552 aa
AA seq
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MSERDGSTLLHKGPCSECGSSDACAVYDDGHAHCFSCGTHFRNAEGPGTPREPANPELIQ
GGRYVDLPKRGLREETCRRYGYVVADFKGKPCQVAPYHDAQGRLVAQKLRFADKSFIVRG
RLKEAGLFGQHLFRHGGKMVVVTEGEIDALSVAQALALKWPAVSIPNGAHGAVKAIKAQL
EWLASYDSIILWFDNDKAGRDAVAAVAPLLPPGKVKIVTAPGDCKDANDVLTRVGVSEVQ
RLVWDAPTYRPDGIVMGEDIELSRLQTIEKGWQTPLPELNRMTGGIHEAELWLLTAGSGI
GKSTTSREWLKKALEDGIPCGAVFLEESKETTAKALIALDQNTPLSRLRENPSILTPAQW
EASYRKLIANGRYFAYDHFGSVESDNLIAKLEYMAVSCGVKLCFLDHISIAVSGLDMDEG
ERRAIDILMTRLRSLIERTRMSVIAVSHLRKVGGDAKSFEQGGQIDLDSLRGSGALKQLS
DTVVAIERDQQAEDNEERDKSRVRLLKCRFTGMTGLADVLRYDRNTGRQVVLTAFPDSVD
TPADKDDEDPPF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagcgcgacggttccacgctgctgcacaagggaccgtgctcggagtgcgggtcc
agcgatgcctgtgccgtctatgacgacggccacgcgcattgtttttcgtgcggcacccac
ttccgcaacgctgaagggcccggaacgccgcgggagcccgccaaccccgaactgatccag
ggaggacgttatgtcgatctaccgaaacgcggacttcgagaggaaacttgccgacgctac
gggtatgtcgtcgcggacttcaagggcaagccttgccaagtcgcgccgtaccacgacgcc
caaggtcgcttggttgctcaaaagctccgcttcgccgacaagtccttcatcgtccgcggg
cgcctgaaggaggccgggctgttcggtcagcaccttttccgccacggagggaagatggtg
gtcgtgaccgagggcgagatcgacgccctgtcggtggcccaggccctggccctgaagtgg
ccggcggtctccatcccgaatggtgctcatggcgccgtcaaggcgatcaaggcgcaactg
gagtggctagcctcctacgactccatcatcctttggttcgacaacgacaaggctggccgt
gatgcagtagctgcggtggccccgctgctgcccccgggcaaggtgaagatcgtcaccgcg
cctggcgactgcaaggacgccaacgacgtactgacccgggtaggtgtctcggaagttcag
cgcctggtatgggacgccccgacgtaccgcccggacggcatcgtgatgggcgaggacatc
gagctgtcccgactccagaccatcgagaagggctggcagactcccctacccgagctgaac
cggatgacggggggaatccatgaggccgagctgtggctgctgaccgcgggctcaggcatc
ggaaagtccacgacatctcgcgagtggctgaagaaggccctggaggacggtatcccctgc
ggcgcggtgttcctggaggaaagcaaggagaccacggccaaggccctgatcgccctggac
cagaacacgccactgtcgcgactgcgcgagaacccctcgatcctgacgccggcccagtgg
gaggcgagctaccgcaagctgatcgccaacgggcggtacttcgcctatgaccacttcggg
tccgtcgaatcggacaacctgatcgccaagctggagtacatggcggtctcctgtggggtg
aagctctgcttcctcgaccacatctccatcgccgtctcggggctggacatggacgagggc
gagcgccgggccattgacatcctgatgacccgcctgcgatccctgatcgagcgcacgcga
atgagcgtgatcgcggtatcgcacctgcgtaaggtcggcggggacgccaagagcttcgag
cagggcggtcagattgacctggactcgctgcgcggctcgggcgccctgaagcaactgtcg
gacaccgtggtcgccatcgagcgcgaccagcaagcggaagacaacgaggagagggacaaa
tcccgggtccgcctcctgaagtgtcggttcactggcatgaccgggctggcggacgttctt
cgctacgaccgcaacaccggccggcaggtcgtgctcaccgcgttccccgactcggtggac
accccggccgacaaggacgatgaagacccgcccttctga
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