Caldimonas thermodepolymerans: IS481_12245
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Entry
IS481_12245 CDS
T06911
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_12245
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
IS481_12245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
FtsK_SpoIIIE
AAA_10
AAA_16
ResIII
TrwB_AAD_bind
T2SSE
SLFN-g3_helicase
AAA_30
CbiA
AAA_7
AAA_19
AAA_28
nSTAND3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QPC30538
LinkDB
All DBs
Position
2606239..2607750
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AA seq
503 aa
AA seq
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MAEPLLIAKHDDIECHLLPGLANRHGLITGATGTGKTVTLQTLAENFSRIGVPVFLADVK
GDLTGISQEGTIAPKMAKTLEERGLPLPEPVACPTTLWDVFGEQGHPVRATISDMGPLLL
GRMLDLNDTQQGVLSLVFKIADDQGLLLLDLKDLRAMLQHVGDNASQYTTEYGNISAASV
GAIQRGLLQIEEQGGDRFFGEPMLDIGDFIQTVRGRGVINILAADKLMNAPRLYATFLLW
MLSELFETLPEVGDLDQPKLVFFFDEAHLLFKDAPKALIERIELVVRLVRSKGVGVYFVT
QNPLDIPDTVLAQLGNRVQHALRAFTPRDQKAVKAAASTMRANPGLNIEAAITELAVGEA
LVSFLDEKGRPSVTQRVYVLPPGSQIGPITPQQRQALLQGSLVAGVYERTVDRESAYEKL
KARAEQANAGADKASREAAAKGPAATSGGWTDVLFGSTGPRGGRREGVVDALAKSAARTI
GNTVGREIIRGVLGSLLGGSRKR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgctcctcattgccaagcacgacgacatcgaatgccatctcctgcccggc
ctggcgaaccggcacgggctgatcaccggcgccaccggcaccggcaagaccgtgacgttg
cagacgctggccgagaacttctcgcgcatcggcgtgccggtgttcctggccgacgtcaag
ggcgacctgaccggcatctcgcaggagggcacgatcgcgcccaagatggcgaagacgctg
gaggagcgcggcctgcccctgcccgagccggtcgcctgcccgaccacgctgtgggacgtg
ttcggcgagcagggccacccggtgcgcgcgaccatctcggacatgggcccgctgctgctg
ggtcgcatgctggacctcaacgacacccagcagggcgtgctctcgctggtgttcaagatc
gccgacgaccagggcctgctgctgctcgacctgaaggacctgcgcgcgatgctgcagcac
gtgggcgacaacgccagccagtacaccacggagtacggcaacatcagcgcggccagcgtc
ggcgcgatccagcgcggcctgctgcagatcgaggaacagggcggcgaccgcttcttcggc
gagccgatgctcgacatcggcgacttcatccagacggtgcgcggccgcggcgtcatcaac
atcctggcggccgacaagctgatgaacgcgccgcgcctgtacgccaccttcctgctgtgg
atgctctcggagctgttcgagacgctgcccgaggtgggcgacctggaccagcccaagctg
gtgttcttcttcgacgaggcccacctgttgttcaaggacgcgcccaaggcactgatcgag
cgcatcgagctggtcgtgcggctggtgcgctccaagggggtgggcgtgtacttcgtcacc
cagaacccgctggacattcccgacaccgtgctggcccagctcggcaaccgggtgcagcac
gcgctgcgcgccttcacgccgcgcgaccagaaggcggtcaaggcggccgcctcgacgatg
cgcgccaacccgggcctgaacatcgaggcggcgatcaccgagctggccgtcggcgaggcg
ctggtcagcttcctcgacgagaagggccgcccgtcggtgacccagcgcgtctacgtgctg
ccgcccggcagccagatcggcccgatcacgccgcagcagcgccaggcgctgctccagggc
tcgctggtggccggcgtctacgaacgcaccgtcgaccgcgaatccgcctacgagaagctc
aaggcccgcgccgagcaggccaacgccggcgccgacaaggcctcgcgcgaggccgccgcc
aaggggccggccgccaccagcggcggctggaccgacgtgctgttcggctccaccggcccg
cgcggcggacggcgcgaaggcgtggtcgacgcgctggccaagtcggccgcgcgcaccatc
ggcaacacggtcggacgggaaatcatccgcggcgtgctgggcagcctgctgggcggctcg
cgcaagcgctga
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