Caldimonas thermodepolymerans: IS481_12660
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Entry
IS481_12660 CDS
T06911
Name
(GenBank) PAS domain-containing protein
KO
K03776
aerotaxis receptor
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm02020
Two-component system
sthm02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IS481_12660
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IS481_12660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sthm02035
]
IS481_12660
Bacterial motility proteins [BR:
sthm02035
]
Flagellar system
Chemotaxis proteins
MCPs
IS481_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_3
PAS
PAS_9
PAS_4
HAMP
PAS_8
CCDC39
Nup54
HAMP_2
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
QPC30608
LinkDB
All DBs
Position
2688517..2690163
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AA seq
548 aa
AA seq
DB search
MRVNLPVLPDEYHFPADVTLVSKTDLKGRILYANPAFIKVSGFSREELLGQPHNLVRHPD
MPEEAFRDMWETISAGQPWSAPVKNRRKDGRYYWVIANVTPLVENGRPIGYMSVRTWASP
EQIAQAEALYATMRREETQGKLVHRLQAGEPLPTGWRGVLAAIGRRSPVSRLQVLCGSAC
LASCALGAWATPATGGAALPVLAALAGSVAVGLAAAARLNSTLIHPFQEMITAANRMAAG
DLTQQIPVRRGLAGRFARALRQLNVNLAAIVSDVRQNVERVRVAANEIATGSSELSVRTE
AQAGSVEKTAASMEEITGTVRQTSDRARQAASLVREAQDATERSSEEMARLEATMHAISQ
SSLRIGQIIEDIDGISFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRALAQRTLNAASE
IKRLAEESGARVAEGEQQVAATASTMQQAVERVGEANSLIGEISIAATEQLQGISQVNEA
VNHLDGITQHNAAMVEQLAASATGLHGQAEALTESVSVFRLDKARLTQPDAVQLRKQMKQ
AATASAAA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcaacctgcctgtccttcccgacgagtaccactttcctgccgacgtcacgctg
gtctcgaagaccgacctcaagggccgcatcctctatgccaacccggccttcatcaaggtc
agcgggttctcccgtgaagaactgctcggccagccccacaacctggtgcgccatcccgac
atgccggaagaagccttccgcgacatgtgggagaccatcagcgccgggcaaccctggtcg
gcgccggtgaagaaccggcgcaaggacggacgctactactgggtgatcgccaacgtcacc
ccgctggtcgagaacggccgcccgatcggctacatgtcggtgcgcacctgggcctcgccc
gagcagatcgcgcaagccgaagcgctgtacgcgacgatgcggcgcgaagaaacccagggc
aagctggtgcaccgcctgcaggccggcgagccgctgcccaccggctggcgcggggtgctc
gccgcgatcgggcggcgcagcccggtgtcgcggctgcaggtgctgtgcggcagcgcctgc
ctggcctcgtgcgcgctcggagcctgggccacgccggcgacgggcggtgccgcgctgccg
gtgctggccgcgctggcgggcagcgtcgcggtgggactggcggccgctgcgcgcctgaac
tcgaccctgatccatcccttccaggagatgatcaccgccgcgaaccgcatggccgccggc
gacctgacgcagcagatcccggtgcggcgcggcctggccggccgcttcgcgcgtgcgctg
cgccagctcaacgtcaaccttgcggccatcgtcagcgacgtgcgccagaacgtggaacgc
gtgcgcgtggccgccaacgagatcgccaccggcagcagcgagctgtcggtgcgcaccgag
gcgcaggccggcagcgtcgagaagaccgccgcctcgatggaggaaatcaccggcaccgtg
cgccagacctccgaccgcgcccggcaggccgcttccctggtgcgcgaggcgcaggacgcc
accgaacgcagcagcgaggagatggcccggctggaagcgacgatgcatgcgatcagccag
tcgtcgctgcgcatcggccagatcatcgaggacatcgacggcatctcgttccagaccaac
ctgctcgcgctcaatgcggcggtggaagccgcccgcgccggcgaacagggccgcggcttt
gccgtcgtcgcgggcgaggtgcgcgccctggcgcagcgcaccctgaacgcggccagcgag
atcaagcggctggccgaggaatccggggcccgcgtggccgaaggcgagcagcaggtggcg
gccaccgcctcgaccatgcagcaggcggtcgagcgcgtcggcgaggccaactcgctgatc
ggcgagatcagcatcgccgccaccgagcagctgcagggcatctcgcaggtcaacgaggcg
gtcaaccacctggacggcatcacgcagcacaacgcggccatggtggagcagctggcggcc
tcggccaccggcctgcacggccaggccgaggcgctgaccgaatcggtcagcgtgttcagg
ctggacaaggcccgcctcacgcagcccgacgcggtgcagctgcgcaagcagatgaagcag
gcggcgaccgccagcgcggcggcctga
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