Caldimonas thermodepolymerans: IS481_12735
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Entry
IS481_12735 CDS
T06911
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00260
Glycine, serine and threonine metabolism
sthm00460
Cyanoamino acid metabolism
sthm00630
Glyoxylate and dicarboxylate metabolism
sthm00670
One carbon pool by folate
sthm00680
Methane metabolism
sthm01100
Metabolic pathways
sthm01110
Biosynthesis of secondary metabolites
sthm01120
Microbial metabolism in diverse environments
sthm01200
Carbon metabolism
sthm01230
Biosynthesis of amino acids
sthm01240
Biosynthesis of cofactors
sthm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IS481_12735
09102 Energy metabolism
00680 Methane metabolism
IS481_12735
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IS481_12735
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IS481_12735
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IS481_12735
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IS481_12735
Enzymes [BR:
sthm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IS481_12735
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
PDH_C
Motif
Other DBs
NCBI-ProteinID:
QPC30623
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Position
2702336..2703583
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AA seq
415 aa
AA seq
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MFDRSVSTIANVDPELWAAIQKENQRQEDHIELIASENYASPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRVKELFGAEHANVQPNSGSQANQGVFFGLLQPGDTIMGM
SLAEGGHLTHGMPLNMSGKWFKVVSYGLNEKEEIDYDAMERLAHEHKPKLIIAGASAYSL
RIDFERFAKVAKAVGAYFMVDMAHYAGLVAAGVYPNPVPFADVVTSTTHKSLRGPRGGII
LMKDHVAKQINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKAYQQQVVKNAQAMAETL
IARGLRIVSGRTESHVMLVDLRPKGLTGKEAEAVLGRAHITCNKNGIPNDPQKPMITSGI
RLGSPAMTTRGFKEAEAIQTAHLIADVLDNPHDEATIETVRAKVAELTRRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgctccgtttccaccattgccaacgtcgatcccgaactctgggctgccatc
cagaaggaaaaccagcgccaggaagaccacatcgagctgatcgcctcggaaaactacgcc
tcgccggccgtgatggccgcgcagggctcgcagctgaccaacaagtacgccgagggctac
cccggcaagcgctactacggcggctgcgaatacgtcgacatcgtcgagcagctggcgatc
gaccgcgtgaaggaactgttcggcgccgagcacgccaacgtccagcccaactccggctcg
caggccaaccagggcgtgttcttcgggctgctgcagcccggcgacaccatcatgggcatg
agcctggccgaaggcggtcacctgacccacggcatgccgctgaacatgagcggcaagtgg
ttcaaggtcgtcagctacggcctgaacgagaaggaagagatcgactacgacgcgatggag
cggctggcccacgagcacaagcccaagctgatcatcgccggcgcctcggcctacagcctg
cgcatcgacttcgaacgcttcgccaaggtggcgaaggcggtcggcgcctacttcatggtc
gacatggcccactacgccggcctggtcgccgcgggcgtctaccccaacccggtgccgttc
gccgacgtggtcacctcgaccacccacaagagcctgcgcggcccgcgcggcggcatcatc
ctgatgaaggaccatgtcgccaagcagatcaacagcgcgatcttcccgggcatccagggt
ggcccgctgatgcacgtgatcgcggccaaggccgtggccttcaaggaagcgctgtcgccc
gagttcaaggcctaccagcagcaggtggtgaagaacgcccaggccatggccgagacgctg
atcgcgcgtggcctgcgcatcgtcagcggccgcaccgaaagccacgtgatgctggtcgac
ctgcgtcccaagggcctgaccggcaaggaagccgaggcggtgctgggccgtgcccacatc
acctgcaacaagaacggcatcccgaacgacccgcagaagccgatgatcaccagcggcatc
cgcctggggtcgcccgcgatgacgacgcgcggcttcaaggaagccgaggccatccagacc
gcacacctgatcgccgacgtgctcgacaacccgcacgacgaagcgaccatcgagacggtg
cgcgccaaggtggccgagctgacccggcgcttcccggtctaccgctga
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