Caldimonas thermodepolymerans: IS481_12750
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Entry
IS481_12750 CDS
T06911
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sthm02044
]
IS481_12750
02035 Bacterial motility proteins [BR:
sthm02035
]
IS481_12750
Secretion system [BR:
sthm02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
IS481_12750
Bacterial motility proteins [BR:
sthm02035
]
Pilus system
Pilus assembly proteins
IS481_12750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
QPC30626
LinkDB
All DBs
Position
complement(2704586..2708242)
Genome browser
AA seq
1218 aa
AA seq
DB search
MDAPISIARRAARRRSAFVLAAVLAGMQAVPAWSAPAQMPFLTRTTNPAHPNLVYTLDDS
GSMQWQSMPDSTLPSSTENRYRMTFHHQDRRARVLSGNTRYEPQVIPTRTNDLISARMRS
PAYNTLYYNPEIRYQPWYRSDGTQFENSNPAAAWIYPTDRPPVGTDTERENAINNGLAVN
LIGEIEAPSNVVWCRSNTSRTANPTSVNDSANRTSWTCNTMDSGREKYAPATYYVLNGAP
NNHANFTRVRIMDSTTFTRGPGRTDCTVVGNVATCTQEQEYQNFANWFTYYRTRQYLAIG
ASTQAFATLDPDSGLRVGYGRINKDQTNIDGRSTGTIERGVRRFIGNDREQFFNWLHGQG
WSDSGTPLKRAMDDVGQYYSWTDARGPWGNTPGTNDTSAQLECRKAYHILMTDGYANETG
GARDTARQGDFDNSNGPVITGPGGASYQYTPSRPYQASGGGTLADLAMYYWNRDLNPNLA
NRVRPDASNPAFWQHMVNFTVGLGVGGTLAYPDDLARIQAGTLNWPTVQNNHATTVDDLW
HAAVNSRGRYLSARDPAEFASALTSILEEIAEREASEGGVAAAAATLQAGNRKYVPTYRT
GSWTGNLTAYELDANGQQLEKLWDAESSLPAAASRNIFIGTRATTGAKAVAFTWDAMSTE
MKAEMGANAVAAWVNHLRGDTSLEGTTQGGITLRRRMARLGDIVNSQPTYVGGLVDMQYQ
YLPEGTAGRESYRAFVNAKRSRTGVIFVGANDGMLHGFRDTDGREVFAFIPRALLSSLPS
LASSSYTHRYFVDGQQTESDAYLNGSWRNVLVGSTGAGARAVYALDVTNPTSMNAGSVLW
EFDSTIDPELGHVMAPIEVGRMKNGEWAAVFGNGPDSASGLARLFIVNLRTGELIRSIQA
GNATNNGLGGVRLIRDANQVVIGAYAGDLQGNVWKFDLTSTTSAQWRVAFSGAPLFTATD
SGGAPQPIMATPQVISHPRGGYMVLVGTGKLYEEGDQTNAQQQSLYGLWDQQILVQSGEN
WVWSSAERITTRSSIVDHSIDADTISGSGDSTYYTVTTTPLDWTTHRGWSLPLTIVAGQR
NLLSPQFLFGYALFETMAPSAEGTVNPCEDANSGVGYNLVLNPLTGAMPTIPIFDTNGDG
VIDSRDTVAAGAQTTWDGRDVVLRERPNPCPSGDCGDNPSPCPPGTKQAVLAGASAGNIS
TCIPIPPPQRWWWRQLFE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggacgctccgatttccattgcccgccgcgctgcccgacgccgcagcgcattcgtactg
gcggccgtgctggccggcatgcaggcggtcccggcctggtcggcgcccgcccagatgccg
ttcctgacgcgtaccaccaacccggcgcatcccaacctggtctacacgctggacgattcc
ggctcgatgcagtggcagtccatgcccgactcgacgttgcccagcagcaccgagaacagg
taccgcatgaccttccatcaccaggatcgtcgggcacgggtgctgtcgggcaacaccagg
tacgagccgcaggtcatcccgacacggaccaacgacctgatctcggcgcggatgcggtcc
cccgcgtacaacacgctctactacaaccccgagatccgctaccaaccgtggtaccggtcc
gacgggacccagttcgagaactccaaccctgcggcggcatggatctatccgaccgaccgt
cccccggtgggcactgacacggagcgggagaacgccatcaacaacgggctggcggtcaac
ctgatcggcgagatcgaggccccctcgaacgtcgtctggtgccgctccaacaccagccgg
acggccaacccgacgtcggtgaacgacagcgccaaccgcaccagctggacctgcaacacg
atggactcggggagggagaagtacgcgccggcgacgtactacgtgctgaacggtgccccc
aacaaccacgcgaacttcacacgggtccgcatcatggactcgaccaccttcacccgcggg
ccggggcgcaccgactgcaccgtggtcggcaacgtcgccacctgcacgcaggagcaggaa
taccagaacttcgccaactggttcacctactaccggacgcgccagtacctcgcgatcggc
gccagcacgcaggcgttcgcgacgctggatcccgactcagggctgcgggtcggctacggc
cggatcaacaaggatcagaccaacatcgacgggcgcagcaccggcacgatcgagcggggg
gtgcggcgcttcatcggcaacgaccgcgagcagttcttcaactggctgcacggccagggc
tggagcgactccggtacgccgctgaagcgtgccatggacgacgtcgggcagtactactcc
tggaccgatgcgcgcggcccctggggcaacacgccgggcaccaacgacacgtccgcgcag
ctggagtgccgcaaggcctaccacatcctgatgaccgacggctacgccaacgaaaccggc
ggtgcacgtgacacagcgcgccagggcgacttcgacaactccaacggcccggtgatcacc
gggcccggcggggcaagctaccagtacacgccctcgcgtccctaccaggcctcgggcggc
ggcacgctggcggacctggcgatgtactactggaaccgcgacctcaacccgaacctggcc
aaccgcgtgcgtcccgacgcgagcaacccggcgttctggcagcacatggtgaacttcacc
gtcggcctgggcgtgggcggcacgctggcctacccggatgacctggcgcgcatccaggcc
ggcacgctgaactggccgaccgtgcagaacaaccatgccaccacggtcgacgacctctgg
cacgctgccgtcaacagccgcgggcgctacctcagcgcgcgcgatccggcggagttcgcc
tcggccctgaccagcatcctggaagagatcgccgagcgcgaggccagcgagggtggcgtg
gcggccgcggccgccacgctgcaggccggcaaccgcaagtacgtgccgacctaccgcacc
ggatcctggaccggcaacctgaccgcctacgagctcgatgccaacgggcagcagctcgag
aagctctgggatgccgaaagcagcctgcccgctgcggcgagccggaacatcttcatcggg
acccgcgccacgaccggggcgaaggcggtggccttcacctgggatgcgatgtcgacagag
atgaaggccgagatgggggcgaacgcggtcgcggcctgggtcaaccacctgcgcggcgac
acctcgctggaaggcacgacgcagggcggcatcacgctgcgccgccgcatggcccggctg
ggcgacatcgtcaactcgcagccgacctacgtgggcgggctggtggacatgcagtaccag
tacctgccggaaggcacggcggggcgtgagtcctatcgggccttcgtcaatgccaagcgc
agccgcaccggcgtgatcttcgtcggtgccaatgacggcatgctgcacgggttccgcgac
accgacgggcgggaagtgttcgcgttcatcccccgcgcgctgctgtcgtcgctgccgtcg
ctcgcatcgtcgtcgtacacgcaccgctacttcgtcgatggccagcagaccgagagcgat
gcctacctcaacggctcctggcgcaacgtcctggtcggcagcaccggtgcgggcgcgcgg
gcggtctacgcgctggacgtgaccaacccgaccagcatgaacgccggcagcgtgctgtgg
gagttcgactccaccatcgatccggagctgggccatgtgatggccccgatcgaggtcggc
cgcatgaagaacggtgagtgggccgcggtgttcggcaacgggccggacagcgccagcggc
ctggcgcgcctgttcatcgtcaacctgcgcaccggcgagctgatccgcagcatccaggcc
ggcaacgcgaccaacaacggcctgggcggcgtgcgcctgatccgcgatgccaaccaggtg
gtgatcggtgcctacgcgggcgacctgcagggcaacgtctggaagttcgacctgacttcg
acgacctcggcgcaatggcgggtggcgttcagcggcgccccgctgttcaccgcaaccgat
tccggcggtgcgccccagccgatcatggcgacgccgcaggtgatcagccatccgcgcggg
ggctacatggtgctggtcggcaccggcaagctctacgaggaaggggaccagaccaacgcc
cagcagcagagcctgtacggcctgtgggaccagcagatcctggtgcagtcgggcgagaac
tgggtctggtccagcgccgaacggatcacgacccgctcgagcatcgtcgaccacagcatc
gacgcggacacgatctcgggttccggcgattcgacctactacacggtgaccacgacgccg
ctggactggaccacgcaccgtggctggtccctgccgttgaccatcgtggccggccagcgc
aacctgctgtcgccgcagttcctgttcggctatgcgctgttcgagaccatggcgccgtcg
gccgagggcacggtcaacccgtgcgaggatgccaacagcggggtcggctacaacctcgtc
ctcaacccgctgaccggtgccatgccgaccatcccgatcttcgacaccaacggggacggc
gtgatcgattcgcgggacaccgtcgccgcgggcgcgcagaccacctgggacggccgcgac
gtggtgctgcgggagcgtcccaacccctgtccgtcgggcgactgcggggacaatccttcg
ccgtgcccgcccggcaccaagcaggccgtgctggcgggcgcgtcggcgggcaacatctcc
acctgcatcccgatcccgccgccgcagcgttggtggtggcgccagctgttcgaatga
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