Caldimonas thermodepolymerans: IS481_13055
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Entry
IS481_13055 CDS
T06911
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sthm03000
]
IS481_13055
Transcription factors [BR:
sthm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
IS481_13055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
QPC30682
LinkDB
All DBs
Position
2767155..2768069
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AA seq
304 aa
AA seq
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MTRPDLRLPSIEGLRAFEAAARLGTFERAADELSITASAVSKRVATVEELLNTQLLVRSG
KSLGLTAAGKEYLEQVRQVLSLLAAVPLHRRAAQRVQRLRVCSPPTFARQVLVPHLQGYS
TAHPEVELEVVLSIPYLDAGPADADVEIRNGAPPSPDARPLMRDVLVPMAAPALLQRLPA
LRTPADLRHAPLLRTPLDPWTPWFRAAGLDWPEPSRGPRLVDLGLLLEAAVSGQGIALAR
PSLALPWLRSGALQPVSTLSIPAAHPYHLLPHAAQGAAPGFAAWLQQICEQVAAEGAELL
SRLA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacccgacccgacctgcgcctgccctcgatcgaaggactgcgagccttcgaggccgcg
gcccgcctcggcaccttcgagcgcgccgccgacgagctcagcatcaccgccagcgcggtg
agcaagcgggtcgccaccgtcgaggagctgctcaacacccagctgctggtgcgcagcggc
aagagcctggggctcaccgcggccggcaaggaatacctggagcaggtgcgccaggtgctc
agcctgctggcggccgtgccgctgcatcggcgcgccgcgcagcgggtgcagcgcctgcgg
gtgtgcagcccgcccacctttgcccgccaggtcctggtgccgcacctgcagggctacagc
accgcccaccccgaggtggagctggaggtggtgctgagcatcccctacctcgacgccggc
ccggccgacgcggacgtggagatccgcaacggcgcgcccccctcgcccgacgcccggccg
ctgatgcgcgatgtcctcgtgccgatggccgcgcccgcgctgctgcagcgcctgcccgcc
ctgcgcacgccggccgacctgcgccatgcgccgctgctgcgcaccccgctggatccgtgg
acgccctggttccgcgccgccgggctggactggccggagccgtcccggggcccgcgcctg
gtggacctgggcctgctgctggaggccgccgtcagcggccagggcatcgcgctggcccgg
cccagcctggcgctgccctggctgcgcagcggcgcactgcagccggtgtccacgctcagc
atcccggccgcccatccctaccacctgctgccgcacgccgcccagggcgccgcgccgggc
tttgccgcctggctgcagcagatctgcgaacaggtcgccgccgaaggggcggaacttctt
tcgcgcctggcctga
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