Caldimonas thermodepolymerans: IS481_13420
Help
Entry
IS481_13420 CDS
T06911
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_13420
Transporters [BR:
sthm02000
]
Other transporters
Pores ion channels [TC:
1
]
IS481_13420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
AsmA_2
DUF5818
AsmA
Motif
Other DBs
NCBI-ProteinID:
QPC30745
LinkDB
All DBs
Position
2846571..2850812
Genome browser
AA seq
1413 aa
AA seq
DB search
MSRPAPPSPAPAGRPRRRWWPWLLAALVLLAALLVGAGAGLRWVLHTESGTRWALDQAAR
HVPGFVVRDPQGSLLGDFQARQLVVPAGATTVEVQQLHWSGLRLHGWRLSAPYVQLGATE
IAAGRVVVRSGLPEEAAAAARPQPPASLRLPLGVQVDALRVDELVLPDQAVPVTALRARL
VAGEQHAIESFSAAWNGLRAEGEARIGADAPLPVQARVRVTSDPEAGAGAPIPAWAQDVQ
AELGADGPLERLAATLSLHMQEQSLQAEAGLAPFEPLPLSRLDARFRKLDLARLLGPFTA
LAPTTQLDGSAVVTLRDGGQPMGIEVELANVVPGSWHALRLPLARAVVQASGEGRRWTVQ
RAELDAAGAPGHPAGRLSATGSWNDGELQLQATLASLVLEALDQRLPPMLLSGPVTVQMT
PGATPDAPFGTVQLRTTLQGGLTRRGRAGAPQALQDGQPVQLVLEADGTPTRYQVTTLEA
RAGEARLQARGSAQRDERERWQVQAGLDLRAFNPAQWVPGPPEAAWRRQRHALNGTVKVD
AEVPAQAPDAATLLRQLRGTLQVALDDSLLAGQAAQLGLKLDADGAGRLGAQGQLLAAGN
TATLDGLVRLPVAGRAAPADDHVRLTLEAPALQRLAGLAEALGLGTLQGQARLQAEVQGP
LGGWIVQATAPAPRRGMGTPALPPLRTEGQADVQALRAGGIGLDRLQGRWDASTEGAGRL
SADLQAAQLRLPGLQVPAATLRADGSLAAHRAQLEAALEPATGRAAATTPDGRPAAPLAL
TLALAGRWDEAGSPPGWRGTLETLALRPTDSAPALLRGEQALPLLVAENLRLAWLEDAGG
GRRLEIEPGQLRLLDQVVRWSEARWRRGAGDPQLDVELQVEPVAIIPLLQRVQPDFGWEG
DLRIGARVSLHTDPEVRARIELARTGGDVRINEFGVVQALGLGELQLRLEAAQGTWRFSQ
RIAGSNLGRIVGDQAVRTLPTALWPQPEAPVAGQLEMQVDNLAGWGIWMPAGWRLGGQLS
AQLEIAGQFGGPNLVGRLEGRQLAVRNAIEGVNLHDGTLRMSFEGETARVETLRFAAGDG
HAELQGSAQLGADPVARLQLQAKQFAVLSRVDRRVVVSGEAAMQLDRERIGVEGRFRADE
GLIDISRADAPSLSEDVVVRGADDEDEDAAAKASAGPARDLALDLRVNLGERFRLRGRGI
DTRLEGDLHLTSPRNRLAVAGEIRTVDGSYQAYGQDLEIERGVLTFVGEVANPRLDIVAI
RPNLDQRVGVTVSGSALSPRVSLFSEPPLSDTEKLALLVTGRSYDTLAGNQTLLLQRAAL
ALLAGDGSGEGRNIMDMMPLDELSVRQTEGAVPDTVVSIGKQISDRIYVGYERGLSAAAG
SWQVVYRIAQRFTLRAQAGQDSALDLVWMFRWN
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcctgcgcccccctcccccgcccccgccggccgtccgcggcgccgctggtgg
ccctggctgctggccgcgctcgtgctgctggcggcgttgctcgtcggcgccggggccggc
ctgcgctgggtgctgcacaccgagtccggcacccgctgggcgctggaccaggccgcgcgc
cacgtgcccggcttcgtcgtgcgcgacccgcagggcagcctgctgggcgacttccaggcc
cggcagctggtcgtgccggccggcgccaccacggtcgaggtccagcagctgcactggtcg
ggcctgcgcctgcacggctggcgactgtccgccccctacgtgcagctgggagccaccgag
atcgcggccggccgcgtcgtcgtgcgcagcggcctcccggaagaggcagcggccgcggcg
cgcccgcagccgccggcatcgctgcgcctgccgctgggcgtgcaggtcgacgcactgcgg
gtcgacgaactggtgctgcccgaccaggccgtgccggtgacggcgctgcgcgcccgcctc
gtcgccggcgagcagcacgccatcgagtccttcagcgctgcctggaacggcctgcgcgcc
gagggcgaggcgcgcatcggcgccgacgccccgctgccggtacaggcccgcgtgcgcgtc
acgagcgaccccgaggccggcgccggcgcgcccatccccgcctgggcgcaggacgtgcag
gccgagctgggcgccgacggcccgctggaacggctggccgccaccctgtcgctgcacatg
caggaacagtcgctgcaggccgaggccgggctggccccgttcgagccgctgccgctgtcg
cggctggacgctcgcttccggaagctggacctggcccggctgctcgggccgttcaccgcg
ctggcgccgaccacccagctggacggcagcgccgtggtgacgctgcgcgacggcggccag
ccgatgggcatcgaggtcgagctcgccaatgtggtgccgggcagctggcacgcgctgcgg
ctgccgctggcgcgcgccgtcgtgcaggccagcggcgaaggcaggcgctggaccgtgcag
cgcgccgagctcgacgccgcgggggcacccggccacccggccgggcggctgagcgccacc
ggcagctggaacgacggcgagctgcagctgcaggccacgctggcctcgctggtgctggag
gcgctggaccagcgcctgccgccgatgctgctgagcggccccgtgaccgtccagatgacg
cccggggccacgccggacgcgcccttcggcaccgtgcagctgcgcaccacgctgcagggc
gggctgacccggcgcggccgcgccggcgccccgcaggcgctgcaggacggccagccggtg
cagctggtgctggaagccgacggcacccccacccgctaccaggtgacgacgctggaggca
cgcgccggcgaagcccgcctgcaggcccgcggcagcgcgcagcgcgacgagcgcgagcgc
tggcaggtgcaggccggcctggacctgcgcgccttcaacccggcgcagtgggtgccgggc
ccgcccgaggcggcctggcgccggcagcgccacgcgctgaacggcacggtgaaggtggac
gccgaggtgccggcccaggcgccggatgcggcaacgctgctgcgccagctgcgcggcacg
ctgcaggtggcgctggacgacagcctgctggccggccaggccgcccagctgggcctgaag
ctcgatgccgacggcgcgggccgcctcggcgcgcaaggacagctgctcgcggccggcaac
accgccacgctggacggcctggtgcgcctgccggtggccggccgcgcggcgccggccgac
gaccatgtccggctgacgctggaggccccggcgctgcagcgcctggccggcctggccgaa
gcgctgggcctgggcacgctgcaaggccaggcgcggctgcaggccgaggtacagggcccg
ctgggcggctggatcgtgcaggccacggcgcccgcgccccgccgcggcatgggcacgccc
gcactgccgcccctgcgcaccgaaggccaggccgacgtgcaggcgctgcgcgccggcggg
atcgggctggaccggctgcagggccgctgggacgccagcaccgagggcgccggccgcctc
agcgccgacctgcaggccgcgcagctgcgcctgccgggactgcaggtgccggcggccacg
ctgcgcgccgacggcagcctggcggcgcaccgcgcgcagctcgaggccgcgctggagccg
gccaccggccgggccgccgcgaccaccccggacggccgccccgccgcgccgctggcgctg
acgctggcgctggccggccgctgggatgaggcgggcagccccccgggctggcgcggcacg
ctggagaccctggcgctgcgcccgaccgacagcgccccggccctgctgcgcggcgagcag
gcgttgccgctgctggtggccgagaacctgcgcctggcctggctggaagacgcgggcggc
ggcaggcgcctggagatcgagcccggccagctcaggctgctcgaccaggtggtgcgctgg
agcgaggcgcgctggcgccggggcgccggcgacccgcagctggacgtggaactgcaggtc
gagccggtggccatcatcccgctgctgcagcgtgtgcagcccgacttcggctgggaaggc
gacctgcgcatcggggcgcgcgtgtcgctgcacaccgaccccgaggtccgcgcgcgcatc
gagctggcgcgcaccggcggcgacgtgcgcatcaacgagttcggcgtcgtgcaggcgctg
ggcctgggcgagctgcagctgcgcctggaggccgcgcagggcacctggcggttcagccag
cgcatcgccggcagcaacctcggccgcatcgtcggcgaccaggccgtgcgcaccctgccc
accgccctgtggccgcagccggaggcgccggtggccggccagctcgagatgcaggtcgac
aacctcgccggctggggcatctggatgccggccggctggcgcctgggcggccagctgagc
gcccagctcgagatcgccggccagttcggcggccccaacctggtcggccgcctggaaggc
cgtcagctcgcggtgcgcaacgcgatcgagggcgtcaacctgcacgacggcacgctgcgc
atgagcttcgagggcgagaccgcgcgcgtcgagacgctgcgctttgccgccggcgacggc
cacgccgagctgcagggcagcgcacagctcggcgccgacccggtcgcgcgcctgcagctg
caggcgaagcagttcgcggtgctgtcgcgcgtggaccggcgcgtggtggtcagcggcgag
gccgcgatgcagctggaccgcgagcgcatcggggtcgaggggcgcttccgcgccgacgaa
gggctgatcgacatcagccgcgccgacgcacccagcctgtcggaggacgtggtggtgcgc
ggcgccgacgacgaggacgaggacgcggccgcgaaggcctcggccggcccggcgcgcgac
ctggccctggacctgcgggtcaacctcggcgagcgcttccgcctgcgcgggcgcggcatc
gacacccggctcgaaggcgacctgcacctgacctcgccgcgcaaccggctggcggtcgcc
ggcgagatccgcaccgtcgacggcagctaccaggcctacggccaggacctggagatcgag
cgcggcgtgctgaccttcgtcggcgaggtcgccaacccgcgcctggacatcgtcgcgatc
cgccccaacctggaccagcgcgtcggcgtgacggtcagcggcagcgcgctgtcgcctcgc
gtgtcgctgttctccgagccgccgctgtccgacaccgagaagctcgcgctgctggtcacg
ggccgcagctacgacacgctggcgggcaaccagaccctgctgctgcagcgcgcggcgctg
gcgctgctggccggcgacggcagcggcgaaggccgcaacatcatggacatgatgccgctg
gacgagctctcggtgcgccagaccgaaggcgcggtgcccgacaccgtggtcagcatcggc
aagcagatctccgaccgcatctacgtcggctacgagcgcgggctgagcgccgccgccggc
tcgtggcaggtggtctaccgcatcgcgcagcgcttcacgctgcgtgcccaggccgggcag
gactccgcgctcgacctggtgtggatgttccgctggaactga
DBGET
integrated database retrieval system
