Caldimonas thermodepolymerans: IS481_13445
Help
Entry
IS481_13445 CDS
T06911
Name
(GenBank) response regulator
Organism
sthm
Caldimonas thermodepolymerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
PAS_4
PAS_9
HisKA
Hpt
PAS_3
PAS
PAS_8
GAF_2
PAS_GdpP
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
QPC30749
LinkDB
All DBs
Position
complement(2856016..2859900)
Genome browser
AA seq
1294 aa
AA seq
DB search
MPRNRHATLQLIAAGLLAAAGWLWAWRGQGLPAAGSLPLLVAAAAWAWRVRTSPAPPPAL
AARHAALEAVVEAVNQARTLGAALEAVGQALARYMGAQGHAVLQVADWNGQTGVVFPWDE
RGNGHESHLDLERLAVVRADDGLAGSAIARHAVAASPGPLPGHPWRAPGACGGVAVPVWS
DDEPVAVVEWYGLQRSTDDVDLQQLLATAMGQLSVLARREVARSGMVLHQERLRRIAMVA
ARVPSGVIIADERGRIEWVNEACSSITGLPAEQLIGRECWALMSDPQTAQALRGAIAEAK
DFRLEFQGRRLLDDGTVAPYWAEIDVAYVLDEQEARFVYLAVLSDVTERQLKAEQLEAER
AHLDELIEHLPVSLYVMEPGQLRLLAVNQHAEREFAVQREALLGLPAEQALGRKLTALIL
PAIRHALDGGEPIEDEFVWTTRQRGERVLNARCIALRHPDGTPRAVIVIARDLTERRRAE
GALMESEARFREFADAVDDHLFITTPDRSSFLYVSDRLQAFWGVTPDEHARNPRAYLEHV
PPEDRPLLDECEQRERQLLPVDFVHRLRHPTRGLRWLRTRTRARQLPGGGIRVYGLCTDI
TEEHEREEELQRARDAAEAASRAKSQFLANMSHEIRTPMNGILGMTELLLGTALSEKQRR
FAQAVYRSGESLLEIINDILDFSKIEAGKLELAPTAFSLRAVVEDTLELMAPRAHEKALE
LNFREQPGLPPVLHGDPLRLRQVLTNLVANAIKFTERGEVVVDVQQVPGVPVPPGQVMLE
FTVRDTGIGIAPEVLPRLFSAFTQAHGGMARRYGGTGLGLAISKQLVEMMGGEIGVTSMP
GQGSRFTFRVPLGIVAGAGEGLVEEDAQQMPALRVLVVEDNETNRTVLENMLGAWGMRVA
LARDGVDALELLERERELGGQFDLALVDMSMPRMNGVQFARAVREQPHWRHLKLMLLSSV
SSPDDVRVAHDVGFQRFVAKPVRKVELRQAILGLSAPPARQREQPLPRLDRHVLVIEDNP
VNQEVIHQMLRRLGCRTHLAHSGLEGLRALCEHRFDLVLMDIQMPGMDGVETLRWFRRGS
GGRFEFRTPPDTPVLAVTANALGGDEERFLAHGFNDYLSKPFRQSQLLAVLTHWLKPAME
DADGRAGAPDAQPTMTAVGTTAARTDDREPKMIEPDPQVFDADAVARLRELDPQGENQLL
LRLFRTFHTSLHRLVPQMEEAHELNDLATIRLAAHTLKSSSASVGAMRLSALCAEIESLI
RSGQPGPYDRLMETIRQEADRVLGSLRTLLGSDR
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaaccgacacgccacattgcagctcatcgccgccggtctgctggctgcggcc
ggctggctgtgggcctggcgcgggcaggggctgcctgccgccggctcgctgccgctgctc
gtcgccgcggcggcgtgggcgtggcgcgtgcgcacgtcgccggccccgccgcccgccctg
gcggcccgccatgcggccctggaggcggtggtcgaggcggtcaaccaggcgcgcacgctc
ggcgcggcgctggaggcggtgggccaggcgctcgcgcgctacatgggcgcccaggggcac
gcggtgctgcaggtggccgactggaacggccagaccggcgtggtgttcccctgggacgag
cggggcaacggccacgaaagccatctcgacctggagcgcctggccgtggtgcgcgccgac
gacggcctggccggcagcgcgatcgcgcgccatgcggtggcggccagtcccgggccgttg
cccgggcacccgtggcgtgcgcccggtgcgtgcggcggggtcgcggtgccggtgtggtcc
gacgacgagccggtggccgtggtcgagtggtacgggctgcagcggtcgacggacgacgtc
gacctgcagcagctgctggccaccgcgatggggcagctgtcggtgctggcacggcgggag
gtggcgcgctcgggcatggtgctgcaccaggagcgcctgcggcgcatcgcgatggtcgcc
gcgcgcgtgcccagcggcgtgatcatcgccgacgagcgggggcgcatcgaatgggtcaac
gaagcctgcagcagcatcaccgggctgccggccgaacagctgatcggccgcgagtgctgg
gcgctgatgtccgacccgcagaccgcgcaggcgctgcgcggggcgatcgccgaggccaag
gacttccggctcgagttccagggccggcggctgctcgacgacgggaccgtcgcgccgtac
tgggccgagatcgacgtggcctacgtgctcgacgagcaggaggcacgcttcgtctacctc
gccgtgctgagcgacgtcaccgagcgccagctcaaggccgagcagctcgaggccgagcgc
gcccacctggacgagctgatcgagcacctgccggtgagcctctacgtgatggaacccggg
cagctgcggctgctggcggtcaaccagcacgccgagcgcgagttcgccgtccagcgcgag
gcgctgctcgggctgccggccgagcaggcgctggggcgcaagctcaccgcgctgatcctg
ccggcgatccgccatgcattggacggcggcgagccgatcgaggatgagttcgtctggacg
acccggcagcgcggcgagcgggtgctcaacgcccgctgcatcgcgctgcgccatcccgac
ggcacgccgcgcgcggtgatcgtcatcgcgcgcgacctgaccgaacgccgccgcgccgaa
ggcgcgctgatggaatcggaggcgcgcttccgcgagttcgccgacgcggtggacgaccac
ctgttcatcaccacgccggaccgctccagtttcctctacgtgagcgaccggctgcaggcg
ttctggggcgtcacgcccgacgagcacgcgcgcaacccgcgcgcctacctggagcatgtc
ccgcccgaggaccggccgctgctggacgagtgcgagcagcgcgagcgccagctgctgccg
gtggacttcgtgcaccgcctgcgccatccgacgcgcggcctgcgctggctgcgcacgcgc
acccgcgcgcgccagctgcccggcggcgggatccgggtctacggcctgtgcaccgacatc
accgaggagcacgagcgcgaggaggagctgcagcgcgcccgcgacgcggccgaggcggcc
agccgggccaagagccagttcctggccaacatgagccatgagatccgcacgccgatgaac
ggcatcctcggcatgaccgagctgctgctcggcacggcgctgagcgagaagcagcgccgc
ttcgcgcaggcggtgtaccgctcgggcgagagcctgctggagatcatcaacgacatcctg
gacttctccaagatcgaggccggcaagctcgagctggcgcccacggccttctcgctgcgc
gcggtggtggaggacaccctggagctgatggccccgcgcgcgcacgagaaggcgctggag
ctgaacttccgcgagcagcccggcctgcccccggtgctgcacggcgatccgctgcggctg
cgccaggtgctgaccaacctggtggccaacgcgatcaagttcaccgagcgcggcgaggtg
gtggtcgacgtgcagcaggtgcccggcgtgccggtgccgcccgggcaggtgatgctggag
ttcaccgtgcgcgacaccggcatcggcatcgcgcccgaggtgctgccgcgcctgttcagc
gccttcacgcaggcccatggcggcatggcgcgtcgctacggcggcaccgggctcgggctg
gcgatttccaagcagctggtcgagatgatgggcggggagatcggcgtcaccagcatgccc
gggcaaggttcgcggttcaccttccgggtgccgctgggcatcgtggccggtgccggcgaa
ggcctggtcgaggaagacgcgcagcagatgcctgcgctgcgcgtgctggtggtggaggac
aacgagaccaaccgcaccgtgctcgagaacatgctgggcgcctggggcatgcgggtggcg
ctggcgcgcgacggcgtcgacgcgctggagctgctcgaacgcgagcgcgagctgggcggg
cagttcgacctggcgctggtggacatgtccatgccgcgcatgaacggggtgcagttcgcc
cgggcggtgcgcgagcagccgcactggcgccacctgaagctgatgctgctgtcctcggtg
tccagccccgacgatgtgcgcgtggcgcacgatgtgggcttccagcgcttcgtcgccaag
ccggtgcgcaaggtggagctgcgccaggccatcctcgggctgtccgcgccgccggcgcgc
cagcgcgaacagccgctgccgcgcctggaccggcacgtgctggtgatcgaggacaacccg
gtcaaccaggaagtcatccaccagatgctgcgccggctgggctgccgcacgcatctcgcg
cattccggtctggagggcttgcgcgccttgtgcgaacatcggtttgatttggtgctgatg
gacatccagatgccgggcatggacggcgtcgagacgctgcgctggttccgccgcgggtcg
ggagggcggttcgaattccgcaccccgccggacaccccggtgctggccgtgacggccaat
gcactgggcggcgacgaggagcgtttcctcgcccacgggttcaacgactacctgtcgaag
cccttccgccagagccagctgctggccgtcctgacgcactggctgaaaccggccatggag
gatgccgacggtcgcgcgggagcgccagatgcccagcccacgatgactgcggtcggaacg
accgccgcgcgaaccgacgatagggagccgaagatgattgaacccgacccgcaggttttc
gatgccgacgccgtcgcgcgcctgcgcgagctcgacccgcagggcgagaaccagctgctt
ttgcggcttttccggacatttcacacatccttgcaccgtctggtcccccaaatggaggag
gcgcacgagctcaacgatctcgccacaatccggctggcggcccacacgctcaagtcgtcc
tcggccagcgtgggggccatgaggctgtcggcgctgtgtgccgagatcgagtccctgatc
cgctccgggcagccgggtccgtacgaccggctgatggagacgatccggcaggaggccgac
cgcgtgctgggcagtttgcgtaccctgctgggatccgaccgatga
DBGET
integrated database retrieval system
