Caldimonas thermodepolymerans: IS481_13820
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Entry
IS481_13820 CDS
T06911
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IS481_13820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthm03021
]
IS481_13820
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_13820
Enzymes [BR:
sthm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IS481_13820
Transcription machinery [BR:
sthm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IS481_13820
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IS481_13820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QPC30818
LinkDB
All DBs
Position
2936714..2936917
Genome browser
AA seq
67 aa
AA seq
DB search
MARITVEDCLQKIPNRFQLVLAATYRARMLSQGHAPKIESKNKPAVTALREVAAGEVGLE
MLRKVPT
NT seq
204 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcatcacggtcgaagactgtctgcagaagatcccgaaccggttccagctggtg
cttgccgccacttaccgcgcccgcatgctcagccagggccacgctccgaagatcgagtcg
aagaacaagccggcggtgacggccctgcgcgaagtcgccgcgggcgaagtcggcctggag
atgctgcgcaaggtcccgacctga
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