Caldimonas thermodepolymerans: IS481_14035
Help
Entry
IS481_14035 CDS
T06911
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IS481_14035 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sthm01007
]
IS481_14035 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sthm03016
]
IS481_14035 (serS)
Enzymes [BR:
sthm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
IS481_14035 (serS)
Amino acid related enzymes [BR:
sthm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IS481_14035 (serS)
Transfer RNA biogenesis [BR:
sthm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IS481_14035 (serS)
Prokaryotic type
IS481_14035 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NPV_P10
TMF_TATA_bd
DUF1664
ABC_tran_CTD
BLOC1_2
TetR_C_38
DUF3450
Uso1_p115_C
Motif
Other DBs
NCBI-ProteinID:
QPC30855
LinkDB
All DBs
Position
complement(2981284..2982579)
Genome browser
AA seq
431 aa
AA seq
DB search
MLDITLLRKDLDAVIERLSRRKSPQPFLDVERFKALESERKTIQIRTEELQAKRNSLSKQ
IGQLKAKGEDTSAVMAEVGGIGDELKASAERLEAIQSELNEMLLQVPNLPHESVPVGADE
TGNVEVRRWGTPRQFDFPVKDHVDLGAPLGLDFDTGARLSGARFAFLRGPVARLHRALAQ
FMLDVQTGEHGYTECYTPYIVNADVLVGTGQLPKFKEDMFWVTRGGDDSGLVQYLISTSE
ISLTNSVREQILAAEQLPIKLTAHSPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQIVHPQ
KSYEALEEMVGHAEAILQKLGLPYRVVTLCTGDMGFGAAKTYDLEVWIPAQGTYREISSC
SNCEAFQARRMQARFKNEKGKPELVHTLNGSGLAVGRALVAVLENYQNADGSVTVPEVLR
PYMGGLTELRP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgctagacatcaccctgctgcgcaaggacctggatgccgtgatcgagcgtctgtcgcgg
cgcaagtcgccccagcccttcctcgacgtggagcggttcaaggcgctggagtccgaacgc
aagaccatccagatccgcaccgaggaactgcaggccaagcgcaacagcctctcgaagcag
atcggccagctcaaggccaagggcgaggacacctccgccgtgatggccgaggtcggcggc
atcggcgacgagctgaaggcctccgccgagcggctcgaggcgatccagtccgagctgaac
gagatgctgctgcaggtgcccaacctgccgcacgagagcgtgccggtcggcgccgacgag
accggcaacgtggaagtgcgccgctggggcacgccgcgccagttcgacttcccggtcaag
gaccacgtcgacctgggcgcgccgctggggctggacttcgacaccggcgccaggctctcg
ggcgcgcgcttcgccttcctgcgcggcccggtggcgcgcctgcaccgcgcgctcgcgcag
ttcatgctcgacgtgcagaccggcgagcacggctacaccgagtgctacacgccctacatc
gtcaacgccgacgtgctggtcggcaccggccagctgcccaagttcaaggaggacatgttc
tgggtcacgcgcgggggcgacgacagcgggttggtgcagtacctgatctccacctcggag
atctcgctgaccaactcggtgcgcgagcagatcctcgccgccgagcagctgccgatcaag
ctgaccgcgcacagcccctgcttccgctccgaggccggcagctacggcaaggacacgcgc
ggcatgatccgccagcaccagttcgacaaggtcgagatggtgcagatcgtgcacccgcag
aagagctacgaggcgctggaagagatggtcggccacgccgaggccatcctgcagaaactc
ggcctgccgtaccgcgtcgtgacgctgtgcaccggcgacatgggcttcggcgcggccaag
acctacgacctggaggtctggatcccggcgcagggtacctaccgcgagatcagctcctgc
tccaactgcgaggccttccaggcgcgccgcatgcaggcccgcttcaagaacgagaagggc
aagcccgagctggtgcacaccctcaacggctcgggcctggccgtcggccgtgcgctggtg
gcggtgctggagaactaccagaacgccgacggcagcgtcaccgtgccggaggtgctgcgc
ccctacatgggcggccttaccgaactgcgcccataa
DBGET
integrated database retrieval system
