Caldimonas thermodepolymerans: IS481_14275
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Entry
IS481_14275 CDS
T06911
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthm03021
]
IS481_14275 (rpoH)
Transcription machinery [BR:
sthm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IS481_14275 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF2390
Motif
Other DBs
NCBI-ProteinID:
QPC30896
LinkDB
All DBs
Position
3033479..3034396
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AA seq
305 aa
AA seq
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MTPSTALAVRDPWSLVPSLGNLDAYIAAVNRLPILTQEEETRYARQYREQNDLEAARKLV
MSHLRLVVSVSRQYLGYGLPHGDLIQEGNIGLMKAVKRFDPAQGVRLVSYALHWIKAEIH
EYILKNWRMVKVATTKAQRKLFFNLRSMKQHLKDDAADADTHRSTLTDREIDTVARELNV
KREEVIEMETRLAGGDVALEPTVEDGEESYAPIAYLADESQEPTRLLEAQRRDELATDGV
ARALEVLDPRSRRIVEERWLKVNDDGSGGKTLHELAADYGVSAERIRQIEAAAMKKMRKA
LAEYA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgtccactgcgctcgctgttcgcgacccttggagcctggtgccctcgctgggc
aacctggacgcctacatcgcggccgtcaaccgcctgcccatcctgacgcaggaggaagag
acccgctacgcgcgccagtatcgggagcagaacgacctggaagcggcgcgcaagctggtc
atgtcgcacctgcgcctggtggtctcggtctcgcgccagtacctgggctacggcctgccg
cacggtgacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgcttcgac
ccggcccagggcgtgcgcctggtgagctacgcgctgcactggatcaaggccgagatccac
gagtacatcctgaagaactggcgcatggtcaaggtggccaccaccaaggcccagcgcaag
ctgttcttcaacctgcgctcgatgaagcagcacctcaaggatgacgcggccgacgcggac
acccaccgctcgacgctgactgaccgggagatcgacaccgtcgcccgcgagctgaacgtc
aagcgcgaggaagtcatcgagatggagacgcgcctggccggcggcgacgtcgcgctggag
ccgacggtcgaggacggcgaggaaagctacgcgccgatcgcctacctggccgacgaaagc
caggagccgacccgcctgctcgaggcccagcgccgcgacgagctggccaccgacggcgtg
gcccgcgcgctggaagtgctggacccgcgcagccgccgcatcgtcgaggagcgctggctg
aaggtcaacgacgacggctcgggcggcaagacgctgcacgaactggccgccgactatggc
gtcagcgccgagcggatccgccagatcgaggccgcggcgatgaagaagatgcgcaaggcg
ctggccgagtacgcctga
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