Caldimonas thermodepolymerans: IS481_14420
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Entry
IS481_14420 CDS
T06911
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_14420
Enzymes [BR:
sthm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IS481_14420
DNA repair and recombination proteins [BR:
sthm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IS481_14420
Prokaryotic type
IS481_14420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
TRPM_tetra
Motif
Other DBs
NCBI-ProteinID:
QPC30925
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All DBs
Position
3056871..3058349
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AA seq
492 aa
AA seq
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MDKALDSALVWFRRDLRAHDHAALYHALKAARRVWCAFVFDATILDPLPRADRRVEFIRD
SLESLDAQLRELGRRHGRPETGLIVVHGRPTEWIPRLAVDLHVQAVYASHDYEPQARERD
ARVRGLLADLGVVLHTVKDIVVFEADEVLSAAGTAYGVFGAYRKAWLKQLAPADLQPWPV
ERHAQALAPLPAHWRRPLPTLQDLGFEPTNLRALKVPTGTEGGHQLLDDFLERIDRYHET
RDYPALKGPSYLSVHLRFGTVSIREVARLAWERAAAGSRGAEAWLGELVWRDFFHQVLHH
HPHVVAHSWRPEYEHVRWERGRHADRLFEAWCTGRTGYPIVDAAMAQLNQTGYMHNRLRM
ITASFLVKDLGIDWRRGERYFAGKLNDYDLAANNGGWQWAASTGCDAQPYFRIFNPVTQS
RRFDPQGRFIRRYLPQLARLPDALLHAPWQASPVELEAAGVVLGRDYPEPVVSHEDARQR
ALRRYAAARTGR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggcgctcgactcggccctggtgtggttccggcgcgatctgcgcgcccacgac
cacgccgcgctgtaccacgcgctgaaggcggcgcgccgcgtctggtgcgccttcgtgttc
gacgccacgatcctcgaccccctgccgcgggccgaccggcgcgtcgagttcatccgcgac
agcctggaaagcctcgatgcacagctgcgcgagctgggccggcgccacggccggccggag
acgggcctgatcgtcgtgcacgggcggcccaccgagtggatcccgcgcctggcggtcgac
ctgcacgtgcaggcggtctatgcgagccacgactacgagccgcaggcgcgcgagcgcgac
gcccgggtgcgcgggctgctcgcggacctgggcgtggtgctgcacacggtcaaggacatc
gtggtgttcgaggccgacgaggtgctgtccgccgccggcacggcctacggcgtgttcggt
gcctaccgcaaggcctggctgaagcagctcgcgccggccgacctgcagccctggccggtg
gagcgccacgcgcaggcactcgcgccgctgccggcgcactggcgccgcccgctgcccacg
ctgcaggacctcggcttcgagccgaccaacctgcgcgcgctcaaggtgcccaccggcacc
gagggcggccaccagctgctggatgacttcctcgagcgcatcgaccgctaccacgagaca
cgcgactacccggcgctcaagggaccgagctacctctcggtgcacctgcgcttcggcacc
gtctcgatccgggaggtggcgcgcctggcctgggaacgcgccgcagccggctcgcgcggc
gccgaggcgtggctcggcgagctggtctggcgcgacttcttccaccaggtgctgcaccac
cacccgcacgtggtggcgcacagctggcggcccgaatacgagcacgtgcgctgggagcgc
gggcgccacgcggaccggctgttcgaggcctggtgcaccgggcgcaccggctacccgatc
gtggacgcggcgatggcgcagctgaaccagaccggctacatgcacaaccggctgcgcatg
atcacggccagcttcctggtcaaggacctaggcatcgactggcgccgcggcgagcgctac
ttcgccgggaagctcaacgactacgacctggccgccaacaacggcggctggcaatgggct
gcctccaccggctgcgacgcgcagccgtatttccgcatcttcaacccggtcacgcagagc
cgccgcttcgacccgcagggccgcttcatccgccgttacctgccacagctcgcccgcctg
cccgatgcgctgctgcacgcgccctggcaggccagtccggtggaactggaggccgccggc
gtggtgctcggccgcgactacccggaaccggtcgtctcgcacgaggacgcgcggcagcgc
gcgctgcggcgctacgcggcggcacgcacgggccgctga
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