Caldimonas thermodepolymerans: IS481_14685
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Entry
IS481_14685 CDS
T06911
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sthm03019
]
IS481_14685 (rapZ)
Messenger RNA biogenesis [BR:
sthm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IS481_14685 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_28
AAA_16
AAA_29
MarR_2
T2SSE
AAA_22
AAA_30
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QPC30970
LinkDB
All DBs
Position
complement(3117126..3118043)
Genome browser
AA seq
305 aa
AA seq
DB search
MSQARDDAAATPREVVLITGISGSGKSVALHALEDAGYFCVDNLPPELIESFLSLEQSRF
TPRVAIAADVRSARSLPLLLPTMAKLRGMGLTVREVFLDASTDTLVRRFSETRRRHPLSD
GRHDSDLAAAHRALIEAIELERELLAELRQASSVIDTSQLRPAQLRSWIRNLVQAPAAQL
TLVFESFAFKHGVPLDADYVFDVRVLPNPYYIRELRPLTGRDADVIAYLEAQPEVPEMVA
QIEAFLRRWLPAFEQDQRNYLTVAIGCTGGQHRSVYCAEQLARRFQGRGTTLVRHRELDA
RDAAA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcacgcgacgacgctgccgccacgccgcgcgaggtggtgctgatcaccggc
atctccggctcgggcaagtcggtggcgctgcatgcgctcgaggacgcgggctacttctgc
gtcgacaacctgccgccggagctgatcgagagcttcctgtcgctggaacagtcgcgcttc
acgccgcgcgtggcgatcgccgccgacgtgcgcagcgcgcgctcgctgccgctgctgctg
ccgaccatggccaagctgcgcggcatgggcctgacggtgcgcgaggtgttcctggacgcc
tccaccgacacgctggtgcggcgcttctccgagacgcgccggcgccatccgctgtccgac
ggccgccatgactcggacctggccgccgcgcaccgcgcgctgatcgaggccatcgagctg
gagcgcgagctgctcgccgagctgcgccaggcgtcgtcggtgatcgacaccagccagctg
cgcccggcgcagctgcgcagctggatccgcaacctggtgcaggcgcccgcggcccagctg
acgctggtgttcgagtcgttcgccttcaagcacggcgtgccgctggatgcggactacgtg
ttcgacgtgcgcgtgctgcccaacccgtactacatccgtgaactgaggcccctgaccggc
cgcgatgccgacgtgatcgcctacctcgaggcgcagcccgaggtgccggagatggtggcc
cagatcgaagccttcctgcgccgctggctgccggccttcgagcaggaccaacgcaactac
ctcaccgtggccatcggttgcaccggggggcagcaccgctcggtgtactgcgccgagcag
ctggccagacgcttccagggccgtggcaccaccctggtccgccaccgggaactggacgcg
cgcgacgccgctgcatga
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