Caldimonas thermodepolymerans: IS481_15395
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Entry
IS481_15395 CDS
T06911
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IS481_15395 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_15395 (ruvA)
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IS481_15395 (ruvA)
RecFOR pathway proteins
IS481_15395 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_8
IMS_HHH
5_3_exonuc
AlkZ-like
Motif
Other DBs
NCBI-ProteinID:
QPC31100
LinkDB
All DBs
Position
complement(3269544..3270116)
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AA seq
190 aa
AA seq
DB search
MIGRLTGVIAEKAPPQVLIDVQGVGYEVDVPMSTFYNLPNLGERVTLLTHFVVREDAQIL
FGFGTAAERDTFRQLIRISGVGPRTALAILSGLSVSDLAQAVSLQEAGRLVKVPGIGKKT
AERLLLELKGKLGPDLAQPAAALNDAQADVLQALVALGYSEKEAAAALKALPPDVGVSDG
IKLALKALTR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtcgtttgacgggcgtgatcgcggagaaggcccctccgcaggtgctgatcgat
gtccagggcgtcggctacgaggtcgacgtgccgatgagcaccttctacaacctgcccaac
ctgggcgagcgcgtgaccctgctcacgcatttcgtcgtgcgcgaggacgcgcagatcctg
ttcggcttcggcacggccgccgaacgcgacaccttccgccagctgatccgcatctccggc
gtcgggccgcgcacggcgctggcgatcctgtcgggcctgagcgtctcggacctggcgcag
gcggtcagcctgcaggaagccggccgcctggtgaaggtgcccggcatcggcaagaagacc
gccgagcgcctgctgctcgagctcaagggcaagctggggccggacctcgcccagccggcc
gcggccctcaacgacgcacaggccgacgtgctgcaggcgctggtggcgctgggctacagc
gagaaggaggccgccgcggcgctgaaggcgttgccgccggacgtgggcgtgagcgacggc
atcaagctcgccctcaaggcgctgacaaggtga
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