KEGG   Caldimonas thermodepolymerans: IS481_15570
Entry
IS481_15570       CDS       T06911                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
sthm  Caldimonas thermodepolymerans
Pathway
sthm00061  Fatty acid biosynthesis
sthm00071  Fatty acid degradation
sthm01100  Metabolic pathways
sthm01212  Fatty acid metabolism
sthm02024  Quorum sensing
sthm04146  Peroxisome
Module
sthm_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sthm00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    IS481_15570
   00071 Fatty acid degradation
    IS481_15570
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    IS481_15570
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IS481_15570
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sthm01004]
    IS481_15570
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sthm04147]
    IS481_15570
Enzymes [BR:sthm01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     IS481_15570
Lipid biosynthesis proteins [BR:sthm01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   IS481_15570
Exosome [BR:sthm04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   IS481_15570
  Exosomal proteins of breast cancer cells
   IS481_15570
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 LPD22
Other DBs
NCBI-ProteinID: QPC31128
LinkDB
Position
3307951..3309897
AA seq 648 aa
MQTTFPRLLLEHARRRPDAPALREKEYGIWQTCTWAQLEQLVRELACGLADAGLRRGQHL
VIIGENRPRLYATMLAVQALGAVPVPLYQDAVAAEFVFPINNAEVAFAVAEDQEQVDKLL
EIRPQCPQLGRIWYDDPRGLRNYAEPGLASLDALIESGRRRHEREPGFFDAEVEQGHPDD
VAAMFFTSGTTGHPKGVVHTHRALLDRAQAGAKFDRLTEREEVLAYLPPAWIGQNCFSFA
QWLACGYVVNCPESASTVTIDMKEIGPTYYFAPPRIFEGLLTSVMIRMEDAGRFKRWLFH
TFMKVARRVGPARMAGQPLSVADQLLYALGDVLIYGPLRNNLGMSRIRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDHEVKADTVGVPIEGVEIKLDDNGEILIRSP
GLLKEYYKNPQATAEIKTADGWYRSGDAGFIDASGHLKIIDRAKDVGRLRGGAHDGAMFA
PKYIENKLKFFPHIKEAVAFGDGREKVCAFINIDFEAVGNWAERRNLPYAGYTDLAGKPE
VYELIRECVEQVNADLCADEKLAGCQISRFLILHKELDADDGELTRTRKVRRGYIAEKYQ
VLVDALYAGRTSQYIETQVRFEDGRTGIVSADLRIADAKTFPPMRRAA
NT seq 1947 nt   +upstreamnt  +downstreamnt
gtgcaaacgacgtttcctcgcctgctgctcgagcacgcacggcgccgccctgacgccccc
gcgctgcgcgagaaggaatacgggatctggcagacctgcacctgggcgcagctggagcag
ctggtgcgcgagctggcctgcggcctggccgacgccggcctgcggcgcggccagcacctg
gtcatcatcggcgagaaccgcccgcggctctacgcgacgatgctggcggtgcaggcgctc
ggcgctgtgcccgtgccgctgtaccaggacgcggtcgccgcggagttcgtcttcccgatc
aacaacgccgaggtggcgttcgccgtcgccgaggaccaggaacaggtcgacaagctgctg
gagatccgcccgcagtgcccgcagctgggccgcatctggtatgacgacccgcgcggcctg
cgcaactacgccgagcccgggctggccagcctggacgcgctgatcgaatccggccggcgc
cgccacgagcgcgagcccggcttcttcgacgccgaggtggagcaaggccatcccgacgac
gtggccgcgatgttcttcacctccggcacgaccggccatcccaagggcgtggtgcacacc
caccgcgccctgctcgaccgcgcgcaggccggcgcgaagttcgaccgcctgaccgagcgc
gaggaggtgctggcctacctgccgccggcctggatcggccagaactgcttcagcttcgcg
cagtggctggcctgcggctacgtggtcaactgccccgagtcggcctcgacggtgacgatc
gacatgaaggagatcggtccgacgtactacttcgccccgccgcgcatcttcgaagggctg
ctgaccagcgtgatgatccgcatggaggatgccggccgcttcaagcgctggctgttccac
accttcatgaaggtcgcgcggcgcgtcggcccggcgcgcatggccggccagccgctgtcc
gtcgccgaccagctgctgtacgcgctcggcgacgtgctgatctacggtccgctgcgcaac
aacctcggcatgagccgcatccgcgtggcctacaccgcgggcgaggcgatcggcccggac
ctgttcaccttctaccgctcgatcggcatcaacctcaagcagctgtacggctcgaccgag
accgcggtgttcgtctgcctgcagccggaccacgaggtcaaggccgacaccgtgggcgtg
ccgatcgagggcgtggagatcaagctggatgacaacggcgagatcctgatccgctcgccc
gggctgctcaaggagtactacaagaacccgcaggccactgccgagatcaagaccgccgac
ggctggtatcgcagcggcgacgccggcttcatcgacgccagcggccacctgaagatcatc
gaccgcgccaaggacgtcggccggctgcgcggcggcgcccacgacggcgcgatgttcgcg
cccaagtacatcgagaacaagctcaagttcttcccgcacatcaaggaagcggtggccttc
ggcgacggccgcgagaaggtctgcgccttcatcaacatcgacttcgaggcggtgggcaac
tgggccgaacggcgcaacctgccgtatgcgggctacaccgacctggcgggcaagcccgag
gtctacgagctgatccgcgaatgcgtcgaacaggtcaacgccgacctctgcgccgacgag
aagctggccggctgccagatctcgcgcttcctgatcctgcacaaggaactcgacgcggat
gacggcgagctcacccgcacgcgcaaggtgcgccgcggctacatcgcagagaagtaccag
gtgctggtcgacgcgctctacgccgggcgcacctcgcagtacatcgagacacaggtcagg
ttcgaggacggccgcaccggcatcgtctcggccgacctgcgcatcgccgacgccaagacc
tttcccccgatgaggagggccgcatga

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