Caldimonas thermodepolymerans: IS481_16005
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Entry
IS481_16005 CDS
T06911
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IS481_16005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_16005
Enzymes [BR:
sthm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IS481_16005
DNA repair and recombination proteins [BR:
sthm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IS481_16005
Prokaryotic type
IS481_16005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QPC31207
LinkDB
All DBs
Position
complement(3380439..3381179)
Genome browser
AA seq
246 aa
AA seq
DB search
MSTQAGLFAAEADNRLREPLAACFDRVGGRWRDTTEAFRASPVGQALIDFVDARVAAGAV
VYPAQVFRALELTPLESVKVVILGQDPYHGPGQAQGLAFSVPAGVRLPPSLRNIYKEVAA
DTGAAVPKDGDLTRWARQGVLLLNTALTVEDGQPQSHAQRGWEALTDALIRQVSREAGPC
VFLLWGAPAQRKRPLVDTTRHAVFTANHPSPLAATRPPQPFIGCRHFSAVNAWLAAHRPD
VAPIAW
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccaggcggggctgtttgcggccgaggccgacaaccggctgcgcgagccgctg
gcggcctgcttcgaccgcgtcggcggccgctggcgcgacaccaccgaggcgttccgtgcc
tcgccggtcggccaggcgctgatcgacttcgtcgacgcccgcgtcgcggccggcgccgtg
gtctacccggcccaggtgttccgcgccctggagctgaccccgctggagtcggtcaaggtc
gtgatcctgggccaggacccgtaccacggcccggggcaggcccaggggctcgcgttttcc
gtgcctgccggggtgaggctgccgcccagcctgcgcaacatctacaaggaggtcgccgcc
gacaccggcgcggccgtcccgaaggacggcgacctgacccgctgggcgcgccagggcgtg
ctgctgctcaacaccgccctgacggtggaggacggccagccccaaagccacgcgcagcgc
ggctgggaggcgctgaccgacgcactgatccggcaggtctcgcgcgaggccggcccctgc
gtgttcctgctgtggggtgcgcccgcgcagcgcaagcggccgctggtcgacaccacccgc
catgcggtgttcaccgccaaccacccgtcgccgctggccgcgacgcgcccgccccagccc
ttcatcggctgccggcatttctcggccgtgaacgcctggctggcggcgcaccgtccggat
gtcgcgccgatcgcatggtga
DBGET
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