Caldimonas thermodepolymerans: IS481_16230
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Entry
IS481_16230 CDS
T06911
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IS481_16230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sthm03000
]
IS481_16230
Transcription factors [BR:
sthm03000
]
Prokaryotic type
Helix-turn-helix
IclR family
IS481_16230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Dimerisation
MarR
Motif
Other DBs
NCBI-ProteinID:
QPC33492
LinkDB
All DBs
Position
complement(3429715..3430536)
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AA seq
273 aa
AA seq
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MPSGDAGRDRHPPAGLVPAVVRAFAVLDLLAGEREPIGLSRIASSLALPKSSVHALCRTM
AQLGYLRRYEDGSYFIGARVLGLAHAFSAHTQVVDEFHRIWSELGQRPEETIILSVLDGA
DIVYVAARPGSHPLGLAFHVGMRLPAHLAATGKSMLAFHEPAAVRERLPALLHPMVQGRQ
PVPIDVFLQEMAETRARGYSIDDEGVREGIYCYGAPVFGAAGLPVAGVGVCIPKALLPSS
GERLRGVVMRVARQLSERIGGRVAPAAFPGSTS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgggcgatgccggccgcgaccggcaccctccggccggcctggtgcctgcggtg
gtgcgcgccttcgcggtgctggacctgctggccggcgagcgcgaacccatcgggctgtcg
cgcatcgcctcgtcgctggccctgcccaagagcagcgtgcacgccctgtgccgcacgatg
gcccagctgggctacctgcgccgctacgaggacggcagctacttcatcggcgcccgggtg
ctcgggctggcgcatgccttcagcgcgcacacccaggtggtcgacgaattccaccgcatc
tggagcgagctgggccagcgcccggaggagaccatcatcctctcggtgctggacggcgcg
gacatcgtctacgtcgccgcgcggcccggcagccacccgctggggctggccttccacgtg
ggcatgcgcctgcccgcgcacctggctgccaccggcaagtcgatgctggccttccacgag
ccggccgcggtgcgcgagcgcctgccggccctgctgcacccgatggtgcagggacgccag
ccggtcccgatcgacgtcttcctgcaggagatggccgagacgcgggcgcgcggctacagc
atcgacgacgagggggtgcgcgaaggcatctactgctacggcgcgccggtgttcggcgcg
gccggcctgccggtggccggcgtcggggtgtgcatccccaaggcgctgctgccctccagc
ggcgagcggctgcgcggcgtggtgatgcgcgtcgcgcgccagttgtcggaacgcatcggc
gggcgcgtcgcgccggccgcgtttcccggatccacgagctga
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