Caldimonas thermodepolymerans: IS481_16795
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Entry
IS481_16795 CDS
T06911
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
sthm
Caldimonas thermodepolymerans
Module
sthm_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_16795
01504 Antimicrobial resistance genes [BR:
sthm01504
]
IS481_16795
Transporters [BR:
sthm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IS481_16795
Antimicrobial resistance genes [BR:
sthm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
IS481_16795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
Beta-barrel_RND
RND-MFP_C
HH_YBHG
BSH_CzcB
YknX_C
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
HH_AAEA_pHBA
HH_CzcB
Biotin_lipoyl
CzcB_C
HAUS6_N
Motif
Other DBs
NCBI-ProteinID:
QPC31356
LinkDB
All DBs
Position
complement(3551607..3552833)
Genome browser
AA seq
408 aa
AA seq
DB search
MHKKTLRTRPGLLAAAALLTLAAAVPAILFGSGRTQAEPVPASAEPAAVPAPVATVTQSE
VMAWDEFSGRLEAVERVELRARVAGTVQAVHFREGGLVRRSDLLFTIDPAPYAAEVERAQ
AQVAAAQARLTHAQNEQVRAQRLWEENAIARRELDERENALREAQAHLRAAEAALRSAQL
NLGYTQVRAPIDGRIGRVEVTVGNQVAAGPGAPVLTTIVSVHPIYASFDADERVVARALQ
QLGAAGALASIERIPVQMGTIDSTGAFPYEGRLQLVDNQVRTGSGTVRVRAVFDNRDGRL
MPGQFARLRMGQAQPMPALLVNERAVGTDQDKRFVMVVGPDDKAAYREVTLGPAVDGLRV
VTRGLEPGERIVVSGLHRVRPGTRIAPQPVAMDAKPELQVRREAADAS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagaagacgctgcgcacccgccccggcctgctggccgcggcggccctgctgacc
ctggcggctgccgtgcccgccatcctgttcggctccggccgcacccaggccgagcccgtg
cccgcgtcggcggaaccggcggccgtgccggcgccggtcgcgacggtcacgcaaagcgag
gtgatggcctgggacgagttctccggccgcctggaggcggtggagcgcgtcgagctgcgc
gcgcgcgtggccggtaccgtgcaggcggtgcacttccgcgaaggcgggctggtgcgccgc
agcgacctgctgttcacgatcgacccggcgccctacgccgcggaggtggaacgggcccag
gcccaggtcgccgccgcgcaggcacgcctgacgcatgcgcagaacgagcaggtgcgcgcg
cagcgcctgtgggaggaaaacgcgatcgcgcgccgcgaactcgacgagcgcgagaacgcg
ctgcgcgaggcgcaggcccacctgcgcgcggccgaggcggcgctgcggtcggcgcagctc
aacctgggctacacccaggtgcgcgcgcccatcgacgggcgcatcgggcgcgtcgaggtg
acggtgggcaaccaggtcgcggccggcccgggtgcgccggtgctgaccaccatcgtctcg
gtgcacccgatctacgccagcttcgacgccgacgagcgcgtcgtggcgcgtgccctgcag
cagctgggcgctgcgggcgcgctcgcgtcgatcgaacgcatcccggtgcagatgggcacg
atcgacagcaccggcgccttcccgtacgaagggcggctgcagctggtcgacaaccaggtg
cgcaccggcagcggcacggtgcgcgtgcgcgcggtgttcgacaaccgtgacggccgcctg
atgccggggcagttcgcgcgcctgcgcatggggcaggcgcaaccgatgccggcgttgctg
gtcaacgagcgcgcggtcggcaccgaccaggacaagcgcttcgtgatggtggtgggcccg
gacgacaaggccgcctaccgcgaggtgacgctgggcccggcggtcgatggcctgcgcgtc
gtcacccgcgggctggagccgggcgagcgcatcgtcgtcagcggcctgcaccgcgtgcgc
cccggcacgcgcatcgcgccgcagccggtggcgatggacgccaagcccgagctgcaggtg
cgccgcgaggcggccgacgcctcctga
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