Caldimonas thermodepolymerans: IS481_17165
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Entry
IS481_17165 CDS
T06911
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sthm01011
]
IS481_17165
Enzymes [BR:
sthm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
IS481_17165
Peptidoglycan biosynthesis and degradation proteins [BR:
sthm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
IS481_17165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QPC31423
LinkDB
All DBs
Position
3630718..3631737
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AA seq
339 aa
AA seq
DB search
MSGLPPSLRAPALAAALCAAAVLAGCGSAPKRGGGYYKDDGPGANPPAGLSSKPDAEPRI
EPYARGTLRPYTALGRSFMPITDDRPFRQRGLASWYGRKFHGKPTASGEPYDMYEMTAAH
PTLPLPSYARVRHLASGREVIVRVNDRGPFHDGRIIDLSYAAALKLGFVQQGSAMVEVER
ITHADIRAGTWQRSPAPEATAVAQAPAPPPPAPAPAPVPAPAPAVVPVAAPVTVAAAPAA
PAPAAEPAPAPPPAPAPAAAPASGGFWVQLGAFRQREGADSFRRQVADEAGWLSPLLAVF
DDASLFRLQAGPYATRDEAAGIAERIRDALKLVPLIVER
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcctgcccccctccctgcgcgcgccggcactggccgcggccctgtgtgcagcc
gccgtgctggccggttgcggctcggcgcccaagcgcggcggcggctactacaaggacgac
ggcccgggcgccaacccgcccgccggactgtcctcgaagccggatgccgaaccccgcatc
gagccctatgcccgcggcacgctgcgtccgtacacggcgctcggacgcagcttcatgccg
atcaccgacgaccgaccgttccgccagcgtgggctcgcgtcctggtacggacgcaagttc
cacggcaagcccacggccagcggcgagccctacgacatgtacgagatgaccgccgcgcac
ccgacgctgccgctgcccagctacgcacgcgtgcgccacctcgcctcggggcgcgaggtc
atcgtgcgcgtcaacgaccgggggcccttccacgacggccgcatcatcgacctcagctat
gccgcggcgctgaagctgggcttcgtgcagcagggcagcgcgatggtggaagtcgagcgc
atcacgcacgccgacatccgtgccggcacctggcagcgcagccccgcccccgaggccacc
gcggtggcccaggcccctgccccgccgccccccgcacccgcaccggcacccgtccctgcg
cccgccccggcggtcgtcccggtcgccgccccggtgacggtggccgccgcccccgcggcg
cctgcacctgcggccgaacccgcgccggcgcccccacccgccccggcgcctgcggcggcg
cccgcgagcggcggcttctgggtgcagctgggtgcgttccgccagcgcgagggcgccgac
agcttccggcgccaggtggcggacgaggcaggctggctctcgccgctgctggcggtgttc
gacgacgcctcgctgttccggctgcaggccgggccgtatgcgacgcgcgacgaggccgcg
ggcatcgccgagcgcatccgcgacgcgctcaagctggtgccgctgatcgtcgagcgctga
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