Sporosarcina thermotolerans: QNH10_12050
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Entry
QNH10_12050 CDS
T09050
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stho
Sporosarcina thermotolerans
Pathway
stho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH10_12050 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stho03019
]
QNH10_12050 (pnp)
03016 Transfer RNA biogenesis [BR:
stho03016
]
QNH10_12050 (pnp)
Enzymes [BR:
stho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QNH10_12050 (pnp)
Messenger RNA biogenesis [BR:
stho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QNH10_12050 (pnp)
Transfer RNA biogenesis [BR:
stho03016
]
Prokaryotic type
tRNA degradation factors
QNH10_12050 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_2
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
WHT47044
LinkDB
All DBs
Position
2116762..2118885
Genome browser
AA seq
707 aa
AA seq
DB search
MTEQKKVYTFDWAGRQLTIETGQLAKQANGAVLVRYGDTTVLSTATTSKTPKALDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLTSRLIDRPIRPLFADGFRNDVQVISLVMSV
DQNCSSEMAAMLGSSLALSVSDIPFEGPIAGVQIGRINGEFIVNPTPEQLNASELDLVVA
GTKDAINMVEAGAKEVAEDVILEAIMFGHEQIIKLIEFQEKIIAEVGKEKMEITLFELDE
AILAEVKDKCETNLINAIQTEEKHAREDAINTVKNEVMEHYKSEEANDDTLKQVKNILDH
LVKNEVRRLITDEKVRPDGRGLDEIRPLASEVGILQRTHGSGLFTRGQTQALSVCTLGAL
GEVQIIDGLGLEESKRFMHHYNFPNFSVGETGPIRGPGRREIGHGALGERALEAIIPDEK
EFPYTIRLVAEVLESNGSSSQASICASTMAMMDAGIPIKAPVAGIAMGLVKKGDNYSILS
DIQGMEDHLGDMDFKVAGTEKGITALQMDIKIEGLSRQILEESLVQAKIGRMKILDHMLS
TISTSREELSRYAPKIIMIRINPDKIRDVIGPGGKVINKIIEETNVKIDTEQDGTIYISS
PESDMNEKAKTMIENIVREAKVGEYYLGKVKRIEKFGAFLEIFPGKDGLLHISEIQEERT
KAVEDVLKMGDELLVKVIEIDNQGRVNLSRKIVLKEQKEAAEKEGKE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacagaaaaaagtttacacatttgattgggctgggaggcaactgaccattgaa
actggacagcttgcaaaacaggcaaatggtgcagtacttgtaagatacggtgatacaacg
gtattgtcgacagctacaacatctaaaacaccgaaagcgcttgatttctttccgttaact
gtaaactacgaggaaagactatacgcagtcggtaaaattcctggaggcttcatcaaacgt
gaaggacgtccatcagagaaagcggttttaactagccgactaattgaccgcccaatccgc
ccattattcgcagacggcttccgtaatgatgtacaagtcatttcgctcgtcatgtcagtt
gatcagaattgctcatccgaaatggctgctatgcttggctcatcccttgcattatccgtt
tctgacatcccgttcgaaggcccgattgcaggtgttcaaatcggacgtattaatggtgaa
ttcatcgtcaacccgactccagaacaactaaatgcaagtgagttggatcttgtagttgcc
ggaactaaggatgccatcaatatggttgaagccggtgccaaagaagttgcagaagatgtt
attctggaagcaattatgttcggtcacgagcagattataaagctgattgaattccaagag
aagattatcgcggaagtcggtaaggaaaaaatggaaatcactttgttcgagcttgacgaa
gcaatacttgctgaagtgaaagacaaatgtgagactaatcttatcaatgcaatccaaacg
gaagagaagcatgcccgtgaagatgcgataaatacagtgaaaaacgaagtgatggaacat
tataagagtgaagaagcgaacgatgatacgctcaaacaagtaaaaaacatcttggatcac
cttgttaaaaatgaggtccgcagactcatcactgatgaaaaggtccgcccggatggccgt
ggtctggatgaaatccgcccgctggcatctgaagtcggtatcttacagcgtacacatggc
tcaggcttgttcacacgtggacaaactcaagcacttagcgtatgtacacttggcgcactt
ggtgaagttcaaatcattgatggacttggcttagaggaatcaaaacgctttatgcaccat
tacaacttcccgaacttcagcgtaggggaaacgggtcctatccgtggacctggccgtcgt
gaaatcggtcacggagcattaggagaacgtgctcttgaagcgattattccggatgagaaa
gaattcccttacacaatccgtctcgtagcagaagtacttgaatccaatgggtcttcatcc
caagcttcgatctgcgcgtcaactatggcgatgatggatgcaggtatcccgattaaagcg
ccagttgctggtattgcaatggggcttgtgaaaaaaggggataactattcaatcctatct
gacattcaaggcatggaagaccatttaggtgatatggacttcaaagttgcaggtactgaa
aaaggaattacagcattacaaatggacattaaaatcgaaggattatcccgacaaatttta
gaggaatcattggttcaagcgaagattggccggatgaaaatccttgatcatatgctttca
acgatttccacatcacgcgaggaactttcgagatatgcaccgaaaatcattatgattcgc
attaatccggataaaattcgagatgtaattggaccaggtggaaaagtgatcaataagatc
attgaagaaactaatgttaagattgacactgaacaagacggtacaatctacatttcatcc
cctgaatccgatatgaatgaaaaggcgaaaacaatgattgaaaatattgttcgcgaagca
aaagttggagaatattatttagggaaagtgaaaagaattgagaaattcggagcattcctt
gagatattccctggtaaagatggtcttcttcacatctcggaaatccaagaagaacgcacg
aaggctgttgaggatgtattgaaaatgggagatgaacttcttgtaaaggtcatcgaaatt
gacaaccaaggccgcgtaaacctgtcaagaaagattgttcttaaggagcaaaaggaagct
gcagaaaaagaaggaaaagaataa
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