Sporosarcina thermotolerans: QNH10_12160
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Entry
QNH10_12160 CDS
T09050
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
stho
Sporosarcina thermotolerans
Pathway
stho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH10_12160 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stho03019
]
QNH10_12160 (rny)
Messenger RNA biogenesis [BR:
stho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QNH10_12160 (rny)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
WHT47054
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Position
2143594..2145159
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AA seq
521 aa
AA seq
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MPDIIINIISALVGLFVGAVVIYLVIKKVNESRVTGAKNSAEQIIEDARREAEALKKEAL
LEAKDENHKLRIEAESEVRERRAELQKQENRLLQREENLDRKDDALNKREAGLERKEDAL
SSRQQHIEQMERKAEDLVAVQQTELERISALTRDEAKRIILDDVEKELSTDIAVMTKESE
QRAKEESEKKAREILSLALQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPVRRETARLALEKLVQDGRIHPARIEEMVDKSRREVDELI
REKGEQTTFDVGVHNLHPDLIKILGRLHFRTSYGQNVLKHSVEVAYLAGLLAAEVGEDVT
LARRAGLLHDIGKAIDHEVEGSHVQIGVELATKYKEHPVVINSIASHHGDEEATSVIAVL
VAAADALSAARPGARSETLENYIRRLQKLEEISESYDGVEKSFAIQAGREVRIIVRPDQI
DDITAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgccagacatcattataaacatcatctccgctttggtaggtctattcgtcggtgcagtt
gttatctatttagttatcaaaaaggtgaatgaatcaagagtgacgggtgccaaaaactct
gcagaacaaatcatcgaagatgcaagacgtgaagcagaagctttgaaaaaagaggcactt
ttagaagccaaagatgaaaatcacaaactgagaattgaagcggaatcagaagtccgtgaa
agaagagcggaattgcagaagcaggaaaaccgccttttacaacgggaagaaaatcttgac
cgcaaggatgatgctctcaataaaagagaagcgggactggagcgtaaagaagatgcgctt
tccagtagacaacagcatattgaacaaatggaacgcaaggcggaagatcttgttgccgtc
caacagacggaacttgaaagaatctcggcactcaccagggatgaagcgaaacgaattatc
cttgacgatgttgagaaggaactttccacggatattgctgtaatgacgaaagaatcggag
caacgtgctaaagaggaatcagaaaagaaagcacgtgaaatcctttctcttgcattacaa
cgtttcgccgcagatcatgtcgcagaaacgactgtatctgtagtgaacttgccgaacgat
gaaatgaaaggacgaatcatcggaagggaaggccgcaatatcagaactttggaaacattg
actggtatcgatctgattatcgatgacacacctgaagcagtcatcctatcaggattcgat
cctgtccgccgtgaaaccgcgcgacttgcacttgaaaaactcgtacaagatggcaggatc
catccggcccggattgaagagatggtagataagtcaagacgggaagtggatgaattgatc
cgcgaaaaaggtgaacaaaccactttcgacgtgggtgtccataaccttcacccggatctt
atcaaaatccttggacgtttgcatttccgtacaagctatggacaaaatgtcctgaagcat
tccgttgaggttgcttatcttgctggactcttagctgcggaagttggcgaagatgttacg
ttggcaaggcgtgcaggactccttcacgatattggtaaagcaattgatcatgaagttgaa
ggaagccacgtccaaatcggagtagaattagctacaaagtacaaagaacatcctgttgta
atcaacagtattgcttcccatcatggtgatgaagaggctacttcggtcattgcagtattg
gttgcggctgctgatgcattatctgctgctagaccgggtgcgagaagtgaaactcttgag
aactacattcgcagactgcaaaaactcgaagagatatcggaatcatatgatggagtcgag
aaatcattcgcaattcaagcgggacgcgaagtccgaattattgtacgtcctgatcagatc
gatgatataacagcccatcgattggcaagggatatacgtaaaagaattgaagaagagctc
gattatccaggtcatatcaaagtgactgtgatccgggagacacgtgctgtcgaatatgca
aaatga
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