KEGG   Sporosarcina thermotolerans: QNH10_12215
Entry
QNH10_12215       CDS       T09050                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
stho  Sporosarcina thermotolerans
Pathway
stho02024  Quorum sensing
stho03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:stho00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QNH10_12215 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    QNH10_12215 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stho03019]
    QNH10_12215 (hfq)
   03036 Chromosome and associated proteins [BR:stho03036]
    QNH10_12215 (hfq)
Messenger RNA biogenesis [BR:stho03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     QNH10_12215 (hfq)
Chromosome and associated proteins [BR:stho03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    QNH10_12215 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: WHT47060
LinkDB
Position
2157680..2157904
AA seq 74 aa
MSQGNMQEVFLNSLRKNNTFVTVFLLNGFQLKGLIKSYDNYTVLLESDGKQQLIYKHAIS
TYVPAKPVLLKDEE
NT seq 225 nt   +upstreamnt  +downstreamnt
atgtcacaaggtaatatgcaagaagtgtttttgaattctttaaggaaaaacaatacattt
gtcactgtttttctgctgaacggttttcaattaaaaggtcttatcaaatcatatgataat
tacaccgttctacttgaatccgatggtaagcaacaattgatttacaagcatgcgatttca
acttacgtacctgcaaaaccggttcttttgaaggatgaagaataa

DBGET integrated database retrieval system