Sporosarcina thermotolerans: QNH10_17050
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Entry
QNH10_17050 CDS
T09050
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
stho
Sporosarcina thermotolerans
Brite
KEGG Orthology (KO) [BR:
stho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stho03400
]
QNH10_17050
DNA repair and recombination proteins [BR:
stho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QNH10_17050
Archaeal homologous recombinant proteins
QNH10_17050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
nSTAND3
SMC_N
RNA_helicase
GTP_EFTU
AAA_16
ABC_tran
DAP_B
Motif
Other DBs
NCBI-ProteinID:
WHT47789
LinkDB
All DBs
Position
complement(3023009..3026086)
Genome browser
AA seq
1025 aa
AA seq
DB search
MKPIQLTMTAFGPYKGTEIVDFRLLEDHRLFVVSGATGAGKTTIFDAICFALYGQASGED
RSESRSMRSDFADDSTQTAVELIFEINRRTYRIMRQIPYLKAGNKTETTARCEFFELTAD
GEIPFVDRQIVSEINRKIEELVGFTQAQFSQIVMLPQGEFRKFLTSDTENKETIMRKIFK
TEEYREVVNRLKMKRDEAQNRLVEEKSKIEGFIRQIPTVIPERESLIFEVLSNEYRNVSQ
VLDGIVNEAEFYSEKMVEDEKKYKLTYEKHAEMLSNYHVAKNLNEQFDQLEQLNKDMETL
TAEIPSVTLKEQRISNAERAAVIHEIEGHFQQLHNEAEVRLKEWNHAVKEAQEAKLSLDS
IEVLYKQEESKQEERAQVTERLIRLRDHLPAVKELAIKESTVKSLEQRLLVSHEEFIVST
KRSEVEKEKLNLMKAQIEKMEFDVIPLDEITEKMSRVESELKIMQDHMKITAEVMKWKQQ
KEKGSVVVRKLRDDFTLMQNLWLNNQAALLADSLQDGEPCPVCGSEHHPTKIHRHSEESV
TREELDRSQIELTKIEGSYQAVCAKYENYLEQLEAKELEMKELQIEGNLEDLSAIKKELT
EQAARLRATRDKLPGLRKALKSQEETAAATQIAQIENEKKVLEQKSLIDKETTLLQREIA
QIPEEMRSLPALQMKITEVESNKTRLDIAWQSVQKSREEARGKLTKAESAEYHCKKTFDE
CSDKKANAEARFKEALELSEFTSETEYREAKLSESERRILKDQVMDFKQRLHSTKEKIVD
LNARLLGKEKVDLIEMHETVQSLKAAYEAAWTEMNKSTEYKTALVSLEASIKRTGEGIDE
LERRVGKIANLYDTIRGQNELKLSFERFIQIDYLERIIQSANERLKDLSNGQFQLLRSDR
QETRGKQSGLGLDVHDGYTGQNRDVKTLSGGEKFNASLSLALGMADVIQSFQGSVSIDTM
FIDEGFGTLDEESLQKAIDTLVDLQKSGRMIGVISHVEELKAALPAILEVKKTREGHSET
KFILK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccattcaattgacaatgacggcatttgggccttacaagggaacggaaattgtg
gattttcgactccttgaagatcatagattattcgttgtctcgggagctactggagcaggg
aaaacaacaattttcgatgcgatttgtttcgcgttatatggacaagcgagtggtgaagac
cgatcagaatcccgctcgatgcgaagtgactttgctgacgattccactcaaacggcggtc
gaattaattttcgaaatcaatcggcgcacatatcgaatcatgcggcaaatcccatacttg
aaagctgggaataaaactgaaacaactgcaagatgtgagttttttgagctaactgctgac
ggggaaatcccatttgtcgaccgtcaaatcgtttctgaaattaatcggaagatcgaagaa
cttgttggttttacgcaagctcaatttagtcagattgtaatgcttccacaaggggaattc
aggaaattcttgacgtccgacacggagaataaagaaacaatcatgcgaaaaatcttcaag
acggaagagtaccgtgaagtcgtcaaccgattgaagatgaaacgagatgaggcccaaaac
cgtttggtcgaagaaaaaagtaagattgaagggtttattcggcaaattcctactgtcata
ccagaaagagaatccctgattttcgaagtcctttccaatgaatatagaaacgtgtcgcaa
gtgcttgacggcatagtaaacgaagccgaattttattcggaaaaaatggtggaagatgaa
aagaaatataaactcacatatgaaaaacatgctgagatgctttctaactatcatgtagcg
aaaaatctcaatgaacaatttgatcaacttgaacagttgaataaggatatggagacttta
acggcagaaattccatcagtcacgttaaaagaacaacgtatatccaatgcagagcgggca
gcagtcatccatgaaatcgaaggccatttccaacagttgcataatgaagctgaagtaagg
ttgaaagaatggaatcatgcggtaaaggaagcgcaagaagcaaaactgtcattggattcg
atcgaagtattgtataaacaagaagagtctaaacaagaagaaagggcgcaagtgacagaa
cggcttatccgtttacgtgaccatcttccagcagtaaaggaattggcaattaaggaatcg
accgtgaaaagcttagagcaacgccttctggtttcgcatgaagaattcatcgtttcgacg
aaaaggtctgaagttgaaaaagagaaattaaatctgatgaaggctcaaattgaaaagatg
gaatttgatgtaatcccattggacgaaattactgaaaaaatgagccgagttgaatctgaa
ttaaaaattatgcaagaccatatgaaaattactgccgaagtgatgaagtggaagcagcag
aaggaaaagggatccgttgttgtacgtaagctgagagatgactttacattaatgcaaaat
ttatggttgaataatcaggccgcgcttttagctgattcgttgcaggacggggagccatgt
ccggtttgcggtagtgagcaccacccgacaaagatccatagacatagtgaagaatcggta
acacgtgaagaacttgatcgaagccaaatcgaattaacaaaaatagaaggttcttaccag
gcggtttgcgctaaatacgagaactacctcgaacaattggaagcgaaagagctggaaatg
aaggagcttcaaattgaaggcaatcttgaagatctgtcggcgatcaaaaaggaattaaca
gaacaagcagcccgcttacgtgcaacaagggataaactgcctggcttaagaaaggcgcta
aagtcacaggaagagaccgctgcggctacgcagattgctcaaattgagaacgaaaaaaag
gttttagaacaaaaatcgcttatagataaagagacaactttattgcaaagggaaatagcc
caaatacctgaagaaatgcgtagcttgcctgccttgcaaatgaaaattactgaagttgaa
tcaaataaaactcgtttggatattgcgtggcagtctgtacaaaaatcacgtgaggaggca
agagggaaactaacaaaggcagaatcggcagagtatcattgtaaaaaaacatttgatgaa
tgttccgataaaaaggcaaatgccgaagccagattcaaagaagctttagagttatccgaa
ttcacttcagaaacggaatatcgggaagcgaaattgtcggaatcagaaagacgtattttg
aaagaccaagtgatggatttcaaacaaaggcttcattcgacaaaggaaaagattgtggac
ctaaatgcccgtttgcttggaaaagaaaaagtggacttgatagagatgcacgaaactgta
caaagtttgaaagcagcgtatgaagctgcctggacagaaatgaataaatcaacagaatat
aaaactgctttggtttcattggaagcaagtattaaaagaactggtgaaggtatcgatgag
cttgaaagaagggtaggcaaaattgccaacctttatgatacgatcagaggtcaaaatgaa
ttgaagctctcattcgaacgattcatccaaatcgattatttggagcgtatcattcaatcc
gcgaatgagagacttaaagacttatcgaacggacaatttcagctattgcgaagtgatcgt
caggaaacaaggggaaaacagagcggtttagggttggatgtgcatgatgggtataccggt
caaaatcgggatgttaagacattatcgggtggcgagaaatttaatgcgtccctcagtctt
gcgttagggatggctgatgttatccagagcttccaagggtctgtctcgattgacacgatg
ttcatcgatgaagggtttgggacattggatgaggagtctttgcagaaggcaatcgatacg
cttgttgacttgcaaaagtctggaaggatgattggtgtcatttctcacgttgaagagtta
aaagctgcattacctgcaattcttgaagtcaagaagacaagagaaggacatagtgaaacc
aaatttatccttaaataa
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