Sporosarcina thermotolerans: QNH10_17355
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Entry
QNH10_17355 CDS
T09050
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
stho
Sporosarcina thermotolerans
Brite
KEGG Orthology (KO) [BR:
stho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stho03016
]
QNH10_17355 (thpR)
Enzymes [BR:
stho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QNH10_17355 (thpR)
Transfer RNA biogenesis [BR:
stho03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QNH10_17355 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
2H-SAK
GhoS
Motif
Other DBs
NCBI-ProteinID:
WHT47836
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All DBs
Position
3073940..3074482
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AA seq
180 aa
AA seq
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MNNHYFIGIKTPSSIEDTVRFFREKYNLSTMYKAIPHTDDLHITLLFIGALSEERIADLV
HGLTTVASQHTKFNLSVSGLSYFGSPKGPRVVYLSVEPSSELEALQESIAAIGRKDLGIE
SDKRFTPHITIAKKRKLTSDFTIPKESYNSIEFNVDGFSLFTIHPSKTPKYEIIEHFSFK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccattactttatcgggattaaaaccccatcttctattgaagatacagtccgt
tttttcagggagaaatacaatctttccactatgtacaaggcgattccgcatacagatgac
ttacatatcaccttactgttcatcggtgcattgtctgaggaaagaatcgcagatttggta
catggacttaccactgtggcaagccagcatacgaaattcaatttatcagtaagtggactt
tcgtattttggatctccaaaaggtccaagagtcgtctatttgtctgtagaaccttcttcc
gaacttgaagcattacaggagtcaatcgctgcgattggaagaaaagaccttggcattgaa
agtgataaacgctttacaccacatattacaattgcgaaaaaacgaaaacttacaagcgat
tttaccattcctaaggaatcatataactccattgaatttaatgtggatggattttcactt
ttcaccattcatccttcgaaaacaccaaaatacgagatcattgaacatttttcattcaaa
tga
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