Streptomyces sp. HP-A2021: MQE23_12305
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Entry
MQE23_12305 CDS
T11535
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sthp Streptomyces sp. HP-A2021
Pathway
sthp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sthp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MQE23_12305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sthp03019
]
MQE23_12305
03400 DNA repair and recombination proteins [BR:
sthp03400
]
MQE23_12305
Enzymes [BR:
sthp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MQE23_12305
Messenger RNA biogenesis [BR:
sthp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MQE23_12305
DNA repair and recombination proteins [BR:
sthp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MQE23_12305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
DUF8096
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
UOB09801
LinkDB
All DBs
Position
2717401..2719566
Genome browser
AA seq
721 aa
AA seq
DB search
MEHTSNADLRAAADTVLARLVGDVSGTARLREDQWRAIEALVADKRRALVVQRTGWGKSA
VYFVATSLLRAQGSGPTVIVSPLLALMRNQVEAAARAGIHARTINSSNTEEWEAVQDEIA
AGEVDVLLVSPERLNNPDFRDQVLPRLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
ADLPPGVPVLATTATANARVTADVAEQLGTGGSSDALVLRGPLDRDSLSLSVLRLSDAAH
RMAWLAEHLDELPGSGIIYTLTVAAAEEVTAFLRQRGHTVASYTGKTENADRQQAEEDLL
ANKVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKE
DEAIWEYFASLAFPSEELVRRTLDILGHAEKPLSLPALEPLVELRRSRLESMLKVLDVDG
AVKRVKGGWIATGQPWTYDAERYAWVARQRKAEQQAMRAYASTTDCRMEFLQRQLDDEAA
KPCGRCDNCAGPRFAADMSGEALDAARVDLGRAGVEVEPRRMWPTGLSAIGVDLKGRIPA
GEQAAPGRALGRLSDIGWGNRLRPMLAAQAPDEPVPEDVAKAVVGVLADWAKGPGGWAPG
VSDPRPRPVGVVTVASRTRPRLIHSLGARIAEVGRLPLLGAVEYAGEVYPGPRSNSAQRL
KALDGALTVPPALASALAEAQGPVLLVDDYTETGWTLAVAARMLRRSGAQEVLPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagcaacgcggatctccgggcggcggccgacacggtcctcgcccgtctc
gtcggggacgtctcgggaacggcccggctgcgggaggaccagtggcgggcgatcgaggca
ctcgtcgccgacaaacgccgcgccctggtcgtccagcgcacgggctggggcaagtccgcg
gtctacttcgtggcgacgtcgctgctgcgggcgcagggcagcggtccgaccgtgatcgtg
tccccgctgctcgcgctcatgcggaaccaggtcgaggcagcggcccgggccggtatccac
gcccggaccatcaactcctccaacaccgaggagtgggaggccgttcaggacgagatcgcc
gcgggtgaggtcgacgtcctgctggtgagtcctgagcggctcaacaatccggacttccgg
gaccaggtgctcccccggctcgccgccgccaccgggctgctggtggtggacgaggcgcac
tgcatctccgactggggccacgacttccggccggactaccgccggctgcgcacgatgctc
gccgacctcccgcccggcgtgccggtactcgcgaccaccgccacagccaacgcgcgcgtg
acggccgacgtcgcggaacagctcggcaccggcggcagctcggacgccctcgtgctgcgg
ggcccgctggaccgggacagcctgagtctgagcgtgctccggctgtctgacgccgcgcac
cggatggcctggctcgccgagcacctcgacgaactgccggggtccgggatcatctacacg
ctcaccgtggccgccgccgaggaggtcaccgccttcctccgccagcgcgggcacacggtc
gcctcatacacgggcaagacggagaacgccgaccggcagcaggccgaggaggatctgctc
gccaacaaggtgaaggcgctggtcgccacctcggcactcggtatgggcttcgacaagccc
gatctgggcttcgtggtgcacctcggatcgccctcctcccccatcgcctactaccagcag
gtgggccgcgcgggacgcggcgtggagcacgccgaggtgctcctgctccccgggaaggag
gacgaagcgatctgggagtacttcgcgtcgctcgccttcccctcggaggaactggtgcgc
cgcacgctcgacatcctcgggcacgcggagaagcccctgtcactgcctgccctggagccc
ttggtggagctgcgccgctcccgcctggagtccatgctcaaggtcctcgacgtggacggg
gcggtcaagcgggtcaaggggggctggatcgcgaccgggcagccctggacgtacgacgcc
gagcggtacgcgtgggtggcacggcagcgcaaggccgagcagcaggcgatgcgcgcatac
gcgtcgacgacggactgccggatggagttcttgcagcgccagctggacgacgaggccgcc
aagccgtgcggtcgctgcgacaactgcgcaggcccgcgcttcgccgcggacatgtccggg
gaggcgctcgacgccgcgcgcgtggacctggggcgtgcgggtgtcgaggtggagccccga
cggatgtggccgaccgggctgtcggcgatcggggtggacctcaagggacgcatcccggcc
ggcgaacaggccgctccggggcgcgcgttggggcgcctgtcggacatcggctggggcaac
cggctgcggcccatgctcgcggcccaggcccccgacgagcccgtgccggaggacgtggcg
aaggccgtggtgggcgtgctggccgactgggccaaggggcccggcggctgggccccgggc
gtgtcggacccgcgcccccgcccggtgggcgtcgtcaccgtcgcctcccgcacacgaccc
cggttgatccactccctgggagcgcgtatcgcggaggtcggccgactgccactgctggga
gctgtcgagtacgcgggcgaggtgtatccggggccccggagcaacagcgcccagcggctg
aaggcgctcgacggggcactgaccgtgccgcccgccctcgcgtccgccctcgccgaggcc
cagggcccggtcctcctcgtggacgactacacggagaccggctggaccctcgcggtcgcg
gcccgcatgctccggcgttccggtgcgcaggaggtgttgccgctggtgctggccgtgcag
ggctga
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