Streptomyces sp. HP-A2021: MQE23_17395
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Entry
MQE23_17395 CDS
T11535
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sthp Streptomyces sp. HP-A2021
Pathway
sthp03420
Nucleotide excision repair
sthp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sthp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MQE23_17395 (pcrA)
03430 Mismatch repair
MQE23_17395 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthp03400
]
MQE23_17395 (pcrA)
Enzymes [BR:
sthp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MQE23_17395 (pcrA)
DNA repair and recombination proteins [BR:
sthp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MQE23_17395 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MQE23_17395 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
UOB10736
LinkDB
All DBs
Position
complement(3867709..3870186)
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AA seq
825 aa
AA seq
DB search
MSSLFDDSFLADLQAQRGPADEPPPPPEDDHVPEPVPDDLFGGKFDVPPDRDAYYRDGAP
RPVVDTAALLEGLNDNQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAERDVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQATDGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTSEHPVDVPPEAEVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQN
YRSTQTILSAANAVIERNESRRPKNLWTNAGAGATITGYVADTEHDEAQFVADEIDRLTD
AGKAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANP
EDSVPLRRILNVPKRGIGDRAEAMIDALAQREKISFPQALKRVDEAYGMAARSTNAVKRF
NTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVAMEFE
QERGEEERGTLSDFLEQVALVADSDQIPDEEDGDGVITLMTLHTAKGLEFPVVFLTGMED
GVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSTLRSAWGQPSYNPPSRFLEEIP
PAYVEWKRTGATAPASSGPVSGVAASLSSSRSRSSASGASGFATRRTSEKPVVSLAVGDR
VTHDQFGLGTVVAVKGTGGNAEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggcccagcggggccccgcg
gacgagcccccgccgccacccgaggacgatcacgtaccggagccggttccggacgatctg
ttcggcgggaagttcgacgtgcccccggaccgggacgcctactaccgcgacggcgccccg
cgcccggtggtggacaccgccgccctcctggaggggctgaacgacaaccagcgcgccgcc
gtcgtgcactccggctccccgctgctcatcgtggccggcgccggctccggcaagacccgt
gtgctcacccaccgcatcgcccacctgctcgccgagcgggacgtacacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgggccaacgcgatgtgggtgatgaccttccacagtgcgtgcgtgcgcatc
ctgcggcgcgagagcaagaagctcggcttcacgtcctccttctcgatctatgacgccgcc
gactccaagcgcctgatggccctggtctgccgtgacctggacctcgaccccaagcgcttc
ccgccgaagtccttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccacggacggcttcgagaagaccctcgcccaggcctacgcgatg
taccagtcgcggctgcgcgaggcgaacgccctcgacttcgacgacctgatcatgacgacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccgccac
gtgctggtcgacgagtaccaggacaccaaccacgcccagtacgccctcgtccgggagctc
gtcggcacctccgagcaccccgtcgacgtaccgcccgaggccgaggtcccgcccgccgag
ctgtgcgtggtgggtgacgccgaccagtcgatctacgccttccgcggcgcgacgatccgc
aacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcagaac
taccgctccacccagacgatcctcagcgcggccaacgcggtcatcgagcgcaacgagtcc
cgccgtcccaagaacctgtggaccaacgcgggcgcgggcgccacgatcaccgggtacgtc
gccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagaccgcctcacggac
gccggcaaggccaaggccggcgacgtcgccgtgttctaccgcaccaacgcccagtcccgt
gtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtccgc
ttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtgctggccaacccg
gaggactcggtgccgctgcgccggatcctcaacgtccccaagcggggcatcggcgaccgc
gccgaggcgatgatcgacgccctcgcccagcgggagaagatcagcttcccgcaggcgctc
aagcgcgtcgacgaggcgtacggcatggccgcgcgctccaccaacgccgtcaagcggttc
aacacgctgatggaggacctccgtacgatcgtcgagtccggcgccggaccggccaccgtg
ctggaggccgtcctggaacgcaccgggtacctcgccgagttgcaggcctccaccgacccg
caggacgagacccggatcgagaacctccaggaactcgccgccgtcgccatggagttcgag
caggagcgcggcgaggaggagcggggcaccctgtccgacttcctcgagcaggtcgcgctg
gtcgccgactccgaccagatccccgacgaggaggacggcgacggcgtcatcacgctgatg
accctgcacaccgccaagggcctggagttcccggtcgtcttcctgaccggcatggaggac
ggcgtcttcccgcacatgcgcgccctcggccagaccaaggagctggaggaggagcggcgc
ctggcgtacgtcgggatcacgcgtgcgcgggaacggctgtatctgacgcggtccacgctg
cgcagcgcctggggccagccgtcgtacaacccgccctcgcgcttcctggaggagatcccg
ccggcctacgtggagtggaagcggacgggtgccaccgcgcccgcgtcctccggcccggtc
tccggggtggcggcctcgctgtcgtcgtcccgctcccgttcgtccgcgtcgggcgcgtcc
ggtttcgccacgcgccggacctccgagaagccggtcgtgtccctggcggtcggggaccgg
gtcacgcacgaccagttcgggctcgggaccgtcgtggcggtgaagggcacgggcgggaac
gccgaggcgaccatcgacttcggggacaccaagccgaagcgcctgctgctgcggtacgcg
ccggtggagaagctgtag
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