Streptomyces sp. HP-A2021: MQE23_17860
Help
Entry
MQE23_17860 CDS
T11535
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sthp Streptomyces sp. HP-A2021
Pathway
sthp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sthp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MQE23_17860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthp03021
]
MQE23_17860
03400 DNA repair and recombination proteins [BR:
sthp03400
]
MQE23_17860
Enzymes [BR:
sthp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MQE23_17860
Transcription machinery [BR:
sthp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MQE23_17860
DNA repair and recombination proteins [BR:
sthp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MQE23_17860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UOB10823
LinkDB
All DBs
Position
complement(3977873..3978895)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggttacaccctcggcaactccctccgccgg
accctcctgtcctcgatcccgggtgcggcggtcacgtccatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctcacggtc
gagcgtggccgcggttacgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcggaccgacttcgacaagctgatcgtcgacgtcgagacgaagcag
gccatgcgtccgcgtgacgccatggcgtccgccggtaagaccctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgcccttgccgccgacctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggctcgttccgag
gccgacctcctcgacattcgtaacttcggtgcgaagtccatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctgaaggacagcccgcccggattcgacccgaccgctgcg
gcggacgccttcggcgccgacgacgacgcggacgcgggcttcgtggagaccgagcagtac
tga
DBGET
integrated database retrieval system
