Streptomyces sp. HP-A2021: MQE23_28650
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Entry
MQE23_28650 CDS
T11535
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sthp Streptomyces sp. HP-A2021
Pathway
sthp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sthp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MQE23_28650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthp03400
]
MQE23_28650
Enzymes [BR:
sthp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MQE23_28650
DNA repair and recombination proteins [BR:
sthp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MQE23_28650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
PIF1
NAT10_TcmA_helicase
PhoH
NPHP3_N
AAA_16
TraI_hel_assoc_N
nSTAND3
DEAD
AAA
ABC_tran
TrwB_AAD_bind
HTH_IclR
SLFN-g3_helicase
RsgA_GTPase
DUF87
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
UOB12778
LinkDB
All DBs
Position
6332569..6334848
Genome browser
AA seq
759 aa
AA seq
DB search
MPNQTGTPAGERRLAVLEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGALLGAQVG
ESLRMEGRWGSHPQYGKQFHVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHFG
LDTLQIIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDASISVVKNQPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQATDQ
GNCYLPEERLIADAVKLLQVGTGLVIECLAELAEAPEDGGDPGVVREKVPGPDGASEPVT
AVYLVPFHRAELSLSAQLLRLLRTEQDRMPGFRAVTWDKALGWLRTRTGADLAPEQEAAV
KLALTEKVAVLTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLSELTGAEAST
VHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQ
LPSVGAGEVLRDLLADGSPIPAVRLTRVFRQAQQSGVVTNAHRINAGQHPLTDGMKDFFL
FVEDDTEEAGRLTVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAVTPG
RPDVPEKRFGGRVFRVGDKVTQIRNNYEKGKNGVFNGTVGVVTSLDPVDQRLTVLTDEDE
EVPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKQLVV
LVGSRRAIGQAVRSVSAGRRCTALDFRLGSQKNDRSNES
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaccagacgggaacccccgccggcgaacggcggctcgccgtgctcgaaggcgtt
ctcgagcgcatcacgtacgccaacgaggagaacggctacacggtcgcccgggtcgacacc
ggcagaggcggcggcgatctgctcacggtcgtgggcgcgctgctcggtgcccaggtcggg
gagtcgctgcgcatggagggccgctggggctcgcacccccagtacggcaagcagttccac
gtggagaactacacgacggtcctgccggccaccgtccagggcatccgccgctacctcggc
tccgggctggtcaagggcatcggcccggtcttcgccgaccgcatcacgcagcacttcggc
ctggacaccctccagatcatcgaggaggagcccaagcggctcatcgaggtcccgggcctc
gggcccaagcggacgaagaagatcgccgatgcctgggaggaacagaaggccatcaaggag
gtcatgctcttcctccagaccgtcgaggtgtccacgtccatcgcggtgcggatctacaag
aagtacggcgacgcctccatctccgtggtgaagaaccagccctaccgcctcgccgccgac
gtctggggcatcggcttcctcaccgccgacaagatcgcccagtccgtcggcatcccgcac
gacagcccggagcgcgtcaaggcgggcctgcagtacgcgctgtcgcaggccaccgaccag
ggcaactgctacctcccggaggagcggctgatcgcggacgcggtgaagctgctccaggtc
ggcaccgggctcgtcatcgagtgcctcgcggagctggccgaggcccccgaggacggcggc
gaccccggggtcgtacgggagaaggtccccggtcccgacggcgcctcggagccggtcacc
gccgtctacctcgtccccttccaccgcgccgaactctccctctccgcccagctgctgcgt
ctcctgcgcaccgagcaggaccggatgccgggcttccgggcggtcacctgggacaaggcc
ctcggctggctgagaacccgcaccggcgccgacctcgcccccgagcaggaggccgccgtc
aagctcgcactgaccgagaaggtcgccgtcctcaccggcggccccggctgcggcaagtcc
ttcacggtccgctccatcgtggagctggcccgcgccaagaaggcgaaggtcgtgctcgcc
gccccgaccggccgggccgccaagcgcctgtccgagctcaccggcgccgaggcctccacg
gtccaccgcctgctggagctgaagcccggcggcgacgcggcctacgaccgggaccgcccg
ctggacgccgacctggtggtggtcgacgaggcgtccatgctggacctgctcctcgccaac
aagctggtgaaggccgttcccccgggagcccatctgctgttcgtcggggacgtggaccag
ctgcccagcgtcggcgcgggcgaggtgctgcgcgacctcctggccgacgggagcccgatc
cccgccgtccgcctcacccgggtcttccggcaggcccagcagtcgggcgtggtgacgaac
gcgcaccggatcaacgccggccaacacccgctcaccgacggcatgaaggacttcttcctc
ttcgtcgaggacgacacggaggaggcggggcggctcacggtggacgtggcggcgcggcgg
atcccggccaagttcgggctggacccccgccgggacgtgcaggtcctcgcccccatgcac
cggggcccggcgggcgcgggcaccctcaacggcctgctccagcaggccgtcacccccggc
cgccccgacgtgcccgagaagagattcggcggacgggtgttccgtgtcggcgacaaggtc
acccagattcgcaacaattacgagaagggcaagaacggcgtcttcaacggcaccgtcggt
gtggtcacctcgctcgacccggtcgaccagcgcctgacggtcctgacggacgaggacgag
gaggtcccctacgagttcgacgagctcgacgagctggctcacgcctacgccgtgaccatc
caccgctcccagggcagcgagtacccggcggtcgtcatcccggtcaccacgggcgcctgg
atgatgctccagcggaacctgctctacacggcggtcacccgggccaaacagctggtcgtc
ctcgtcggttcgcgcagggcgatcggccaggcggtgcgctccgtttccgcgggccgccgg
tgcacggcactcgacttccggctcggttcgcagaaaaatgatcgatcaaatgagtcgtga
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