Sulfobacillus thermotolerans: BXT84_13075
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Entry
BXT84_13075 CDS
T06144
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sthr
Sulfobacillus thermotolerans
Pathway
sthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BXT84_13075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthr03021
]
BXT84_13075
03019 Messenger RNA biogenesis [BR:
sthr03019
]
BXT84_13075
Transcription machinery [BR:
sthr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BXT84_13075
Messenger RNA biogenesis [BR:
sthr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BXT84_13075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
NACHT
Spore_III_AA
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AUW95592
LinkDB
All DBs
Position
complement(2657440..2659575)
Genome browser
AA seq
711 aa
AA seq
DB search
MAVEETKPKRRRTSRTKNVEAAQSATPAEQSSSVAAEDAVETASVATPKKRGRKKKTELS
TESQVTAEQGVEPVSDEKPRRSRRKSQKAQTEEALPVQTATQMAGASEGAETGESPEVKK
PKRRSKKTMERVAESTDVSPEQTVAAPATPVEPAKPPETELAAPAALPSSPEVTIPAATT
PTTTSSDTPRPDPSLASAPALPAVPAVIAPPAQSVSVKTGPAASPTPPPVQPGGQDRPGV
RDKNPAFNAGNTNNGAPRPAPSGGRDMSKRPGPSGTQQGAPRRDLPRPTRENQLSMAQLD
AMTLLDLYKLARSLNVENFRSYRKGELIWEILRARTHKDGFIFAEGLLDVIGDYGFLRPT
DFQRSREDVYVSASQIRRFDLRAGDKVSGQARPPKDGERYFALLRVEAVNGMSPEKASER
PDFNGLTPIFPQSRFYLETTREELATRLVDIISPIGKGQRGLIVAPPKAGKTVLLKKLAN
AIAVNSPETHLMVLLIDERPEEVTDMQRSVRAEVASSTFDEPPEDHIRVAEMVLERAKRI
VEMGRDVVIFLDSITRLARAYNLTLPASGRTLSGGMDPAALHKPKRFFGAARKVEEGGSL
TILATALVDTGSRMDDVIYEEFKGTGNMELHLDRKLAERRTFPAVDIKRSGTRREDLLLT
PEELEVVWMVRKATHNLKDVEATELLLQNLRRTKSNAEFFRMFAAMQGGSN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaagagacgaagcccaagcgtcggcgaacttcgcggacgaagaatgtagag
gctgcccagtctgcaacgcctgcagaacaatcgtcgtcggtggcagcggaggatgcggta
gagactgcatccgtggcaacacctaaaaagagagggcgtaagaaaaaaaccgagctctct
accgaatctcaagtcactgctgagcaaggtgtcgaaccggtctcggacgagaagccccgc
aggtcgcggcgtaaatcgcaaaaggcccagacggaagaggctcttcctgttcagacggca
acacaaatggccggcgcgtcagagggagccgaaaccggtgaaagccctgaggttaagaag
cctaagcggcgttcgaaaaagactatggaacgcgttgccgagtcgaccgatgtttctcct
gaacaaacggtagcggctcctgctacgccagtagaacctgcgaagccgccagaaacggag
ttggcagctccagccgccttgccatcatcgccagaggtgacgataccagcagcaaccaca
ccgaccaccacgagttctgacacccctcgtcctgatccttccctcgcttcggctcctgcg
ttgccggctgttccggccgtcatcgcgccaccggcgcaatcggtgtctgtaaaaacgggt
ccggccgcgtctcccacgccgccacctgttcaaccaggtgggcaggatcgtcccggcgta
cgggataaaaatcctgcgtttaatgcggggaacacaaacaacggggctccgcgtcctgca
ccctccggtggacgcgatatgtccaaacggcctggaccttcgggaacgcaacaaggcgcg
ccgcgtcgtgacttaccgcgtccgacccgcgaaaatcaattgtcgatggcgcaactagat
gcgatgacgctgttggatttgtataagctggcccgttccttaaatgtggaaaactttcgg
tcttaccgtaaaggggaactcatttgggaaatattgcgggcgcgtacacacaaagatggc
tttatttttgcagaaggtctgctcgatgtcattggtgactacggatttttacggccaacg
gactttcagcgttcccgggaagatgtttatgtatcggcctctcaaattcggcgctttgac
ttgcgtgcgggtgacaaagtgtcgggtcaagctcgtcccccgaaagatggcgagcgatat
ttcgcattgctccgagtggaagcggttaacgggatgtcgccggaaaaagcgtcagaacgt
ccggatttcaatggccttacgccaatctttccccagtcgcgattttatttggaaacaacc
cgcgaagagttggccacgcgtctggtcgatatcatttcgccgattgggaaaggacagcgc
ggcttgattgtggcaccgcccaaggcgggaaaaacggttctgcttaagaagcttgccaat
gccattgccgtcaatagtccggagacgcatctgatggtcctgctgattgacgaacgccct
gaggaagtcaccgatatgcaacgctccgtgcgtgcggaggtggccagttcaacctttgat
gagcccccggaagatcatatacgggttgccgaaatggtcttggaacgtgccaaacgcatc
gtagaaatgggacgcgacgtggttattttcctcgactcgatcacccgcttggcaagagct
tacaacctcacgcttccagcatcgggtcggacattgtctggtggaatggatccagcggct
ttacacaagccgaagcgattctttggggctgcacggaaagtggaagaaggcgggagtctc
acgattttagccaccgcgttggtggatacgggctcgcggatggatgacgtgatttatgaa
gaatttaaaggcacgggcaatatggaactgcatctcgatcggaaattggccgaacgtcgg
acgttcccggctgtcgatatcaaacgttcgggtacacgtcgtgaagacttgctcttgacc
ccagaagagttagaagtggtgtggatggttcgtaaggccactcataatctgaaagatgtc
gaggcgacggaattgcttctgcagaatttgcgccgaacgaagtctaatgccgaattcttc
cgcatgtttgccgcgatgcaaggaggctccaattaa
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