Streptococcus thermophilus S9: AVT04_03780
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Entry
AVT04_03780 CDS
T04785
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sths
Streptococcus thermophilus S9
Pathway
sths03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sths00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AVT04_03780 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sths03019
]
AVT04_03780 (groEL)
03110 Chaperones and folding catalysts [BR:
sths03110
]
AVT04_03780 (groEL)
03029 Mitochondrial biogenesis [BR:
sths03029
]
AVT04_03780 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sths04147
]
AVT04_03780 (groEL)
Enzymes [BR:
sths01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AVT04_03780 (groEL)
Messenger RNA biogenesis [BR:
sths03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AVT04_03780 (groEL)
Chaperones and folding catalysts [BR:
sths03110
]
Heat shock proteins
HSP60 / Chaperonin
AVT04_03780 (groEL)
Mitochondrial biogenesis [BR:
sths03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AVT04_03780 (groEL)
Exosome [BR:
sths04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AVT04_03780 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AVT04_03780 (groEL)
Exosomal proteins of breast cancer cells
AVT04_03780 (groEL)
Exosomal proteins of colorectal cancer cells
AVT04_03780 (groEL)
Exosomal proteins of bladder cancer cells
AVT04_03780 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Tubulin
DUF4142
Motif
Other DBs
NCBI-ProteinID:
ALX91025
UniProt:
A0AAP2WBR8
LinkDB
All DBs
Position
complement(716919..718538)
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AA seq
539 aa
AA seq
DB search
MAKDIKFSSDARAAMVRGVDTLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE
AAVAAAVEELKVIAQPVANKEAIAQVAAVSSRSEKVGEYISEAMERVGNDGVITIEESRG
METELEVVEGMQFDRGYLSQYMVTDNEKMVADLENPYILVTDKKISNIQDILPLLEEVLK
TSRPLLIIADDVAGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAVLTGATVIT
EDLGLELKDATMESLGQASKVTVDKDSTVIVEGAGSAEAIANRVNLIKSQLETTTSEFDR
EKLQERLAKLSGGVAVIKVGAATETALKEMKLRIEDALNATRAAVEEGIVAGGGTALVNV
IAKVAELDLEGDDATGRNIVLRALEEPVRQIAYNAGYEGSVIIDKLKNSPVGTGFNAANG
EWVDMVESGIIDPVKVTRSALQNAASVASLILTTEAVVADKPEQKAPAAPATDPGMMGY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattttcatcagatgcacgtgcagcaatggttcgtggtgttgat
actttagctgataccgttaaggtaacgcttggccctaaaggtcgtaatgttgttttggaa
aaggcttttggttcaccacttatcactaatgatggtgtgacaattgctaaagaaattgaa
cttgaagatcattttgaaaatatgggtgccaagctcgtcagcgaagtggcttcaaaaact
aatgatattgccggtgacggaacaactacagccactgttttgacacaagctattgttcgt
gaggggctaaaaaatgtaacagctggtgctaatccaatcggtatccgtcgtgggattgaa
gcagctgtagctgcagctgtggaagagcttaaagtcattgctcaaccagttgctaataag
gaagctattgctcaagttgctgcggtttcatctcgctctgaaaaagttggtgaatacatt
tcagaagcaatggaacgcgttggtaatgatggtgttatcactattgaagagtctcgtggt
atggagacagaactcgaagtggttgaaggtatgcaatttgaccgtggatatctttctcag
tacatggttactgataatgaaaaaatggtcgcagatcttgaaaatccatatattcttgtg
actgacaagaaaatttcaaatatccaagatattcttccactcttggaagaagtgcttaag
accagtcgtccacttttgattattgctgacgacgtggctggtgaagctcttccaacactt
gttcttaacaaaattcgtggaaccttcaatgtcgttgctgttaaggcgcctggctttggt
gaccgtcgtaaagcgatgttggaagacattgctgtattgactggagcaactgttattact
gaggatcttggtcttgaacttaaggatgcaactatggaatcacttggtcaggcttcgaaa
gtaactgtggataaggatagtacagttatcgttgaaggagcaggaagcgcagaagcaatt
gctaaccgtgttaacctcattaaatctcaattggaaacaacaacatctgaatttgaccgt
gaaaaacttcaagagcgtttggctaaattgtcaggtggtgttgcagttattaaggttggt
gcagccacagaaacagctcttaaagaaatgaaacttcgtatcgaagatgctcttaatgct
actcgtgccgctgttgaagaaggtatagtagctggtggtggtacagccctagttaacgtc
attgctaaggttgctgaacttgatcttgaaggtgacgatgctacaggacgtaatattgtc
ctacgtgccttggaagaacctgttcgtcaaattgcttataatgccggttatgaaggttca
gttatcattgataaattgaagaatagcccagttggtacaggatttaacgctgccaatggc
gaatgggtagatatggttgaatcaggaatcattgacccagttaaggtaacacgttcagcc
cttcaaaatgctgcttcagtagctagtcttatcttgacaacagaagcagtcgttgccgac
aaacctgaacaaaaggctccagcagcgccagctacggatccaggaatgatgggttactaa
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