Streptococcus thermophilus S9: AVT04_05560
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Entry
AVT04_05560 CDS
T04785
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sths
Streptococcus thermophilus S9
Pathway
sths03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sths00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AVT04_05560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sths03021
]
AVT04_05560
03400 DNA repair and recombination proteins [BR:
sths03400
]
AVT04_05560
Enzymes [BR:
sths01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AVT04_05560
Transcription machinery [BR:
sths03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AVT04_05560
DNA repair and recombination proteins [BR:
sths03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AVT04_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SusF_SusE
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
ALX91286
UniProt:
A0AAP2RP18
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All DBs
Position
1028816..1029754
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AA seq
312 aa
AA seq
DB search
MIEFEKPIITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTVPGVREDVMQIILNIKGLAVKSYVEDEKTIELDVQGPAEVTAGDILTDSDIEIVN
PDHYLFTIAEGASFQATMTVSTNRGYVPAEENKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIVTNGTIIPEDALGLSARILIEHLNLFTDLTDVAKATDVMKETEK
VNDEKLLDRTIEELDLSVRSYNCLKRAGINTVHDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggcaaa
tttgtcatcgaaccactagaacgtggttatggtacaactttgggtaactctcttcgtcgt
gtactcttgtcatcacttccaggtgctgccgtaacatcaattaaaattgatggagtgctc
cacgagtttgataccgtaccaggcgtccgtgaagacgtgatgcaaattatccttaatatt
aagggacttgctgtaaaatcttacgtcgaagacgaaaaaacaattgaacttgatgttcaa
ggtccagctgaggttactgctggagatatcttgactgatagtgacattgaaattgttaac
cctgatcattatctttttactatcgctgagggtgcttcattccaagcaacaatgacagta
tctacaaaccgtggttatgttccagcagaagaaaataaaaaagatgatgcaccagtggga
actttggctgtagattcaatctacacaccagtgaaaaaagtcaattatcaagttgaacct
gctcgtgtaggtagcaatgatggttttgataaattgacaatcgaaatcgtgacaaacgga
acaatcatcccagaagatgccctcggtctctcggctcgaattttgattgaacacttgaat
ttgtttacggatcttactgatgtggctaaagctacagatgtgatgaaggaaactgaaaaa
gtgaacgatgaaaaattgcttgatcgtaccatcgaagaacttgatttgtctgtacgctca
tataactgtttgaaacgtgccggtatcaataccgttcatgatttaacagagaagactgag
cctgaaatgatgaaagtccgtaacctaggtcgtaaatcacttgaagaagtcaaagttaaa
ttggctgatcttggacttggacttaaaaatgataaataa
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