Streptococcus thermophilus S9: AVT04_06270
Help
Entry
AVT04_06270 CDS
T04785
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sths
Streptococcus thermophilus S9
Pathway
sths03030
DNA replication
sths03410
Base excision repair
sths03420
Nucleotide excision repair
sths03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sths00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVT04_06270
03410 Base excision repair
AVT04_06270
03420 Nucleotide excision repair
AVT04_06270
03440 Homologous recombination
AVT04_06270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sths03032
]
AVT04_06270
03400 DNA repair and recombination proteins [BR:
sths03400
]
AVT04_06270
Enzymes [BR:
sths01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVT04_06270
DNA replication proteins [BR:
sths03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AVT04_06270
DNA repair and recombination proteins [BR:
sths03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AVT04_06270
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVT04_06270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ALX91404
LinkDB
All DBs
Position
1152896..1155535
Genome browser
AA seq
879 aa
AA seq
DB search
MTNQKKLLLIDGSSVAFRAFFALYNQIDRFRNNNGLHTNAIYGFHLMLDNLLERIQPTHV
LVAFDAGKTTFRTEMFADYKAGRAKTPEEFREQLPYIREMLAARGIAYYDLAQYEADDII
GTLAKMAENTSEAFQITVVSGDKDLIQLTDENTVVEISKKGVAEFEAFTPDYLMEKMGIT
PAQFVDLKALMGDKSDNIPGVTKIGEKTGLKLLLEHGSLEGIYDHIDEMKKSKMKENLIN
DKEQAFLSKTLATIDTQSPIEIGLDDTAFKGPNLEKLLAFYDEMGFVHFKNALRGEAVPQ
DFDVAYVEPSQVTADHFSSEDFFYFEILGDNYHTEPIIGFAWGNEKQIYASTDTDLLKSE
AFQAALSKAVNIYDFKRSKVLLSHLGIDLPTANFDARLAKYLLSTVEDNELSTIARLYTD
LPLETDEVVYGKGAKRAIPEKEVLLSHLAKKVKVLQVAKPVMLEKLAEHGQSELLFDMEL
PLANVLAKMEMAGIKVDGQTLNEMAVENQAVIDKLTQDIYEMAGEEFNINSPKQLGVILF
EKMGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVAKILEYRQITKLQSTYVLGLQDYILE
DGKIHTRYMQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPSTKDAVLLSSDYSQIE
LRVLAHISGDEHLIAAFKEGADIHTSTAMRVFGIEKPEDVTPNDRRNAKAVNFGIVYGIS
DFGLSNNLGISRKKAKEYIDTYFERYPGIKAYMDNVVREAKNKGYVSTLFHRRRELPDIN
SRNFNVRNFAERTAINSPIQGSAADILKIAMINLDKALVEGGYKTKMLLQVHDEIILEVP
RDELLAMKALVKETMEAAVELAVPLIADENEGCTWYEAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcaaaaaaaattactattaatcgacggttcgtccgttgcctttcgtgctttt
ttcgcactctataatcaaattgaccgttttcgtaacaataacggccttcataccaatgcc
atctacggctttcaccttatgttggacaacctacttgagcgtattcagccgacccatgtc
ttagtagcttttgatgcgggaaaaacaacttttcgtacagagatgtttgcggactataag
gctggtcgtgccaagactccagaggaattccgtgaacagctcccttatatccgtgagatg
ttggctgcacgtggcattgcctattatgacttggctcagtacgaggcagatgacattatc
ggtaccttagctaagatggctgaaaatactagtgaggcctttcaaattactgttgtttct
ggggataaagacttgattcagctgactgatgaaaatacagtcgttgagatttcgaagaaa
ggcgtagctgagtttgaggccttcactcctgactatctcatggagaaaatggggattact
ccagctcaattcgtcgatcttaaggccctcatgggtgacaagtccgacaatattccaggg
gttactaagataggtgaaaagactggtctcaagctcctcttggaacacggttcccttgaa
ggcatctatgaccacattgatgagatgaaaaagtccaaaatgaaggaaaatctcatcaac
gacaaggaacaagccttcctttctaagaccttggcgaccattgatacacagtcacctatt
gaaattggcctagatgatacggcctttaagggacctaaccttgaaaaattgctagccttt
tatgacgagatgggctttgttcatttcaaaaatgctcttcgcggagaggctgtcccacag
gattttgatgtggcctatgtagagcctagccaagtgacagcggatcactttagctctgaa
gatttcttctattttgaaatcctcggtgacaattatcacacagaacctatcatcggtttt
gcttggggaaatgaaaagcagatttatgcgtctacagatactgacctactcaaatcagaa
gcattccaagcagctctttctaaggctgttaatatctacgatttcaagcgcagtaaggtc
cttttgagccatctaggtattgacttgccgacagctaattttgatgcccgtttagccaag
tatttgctctcaactgttgaggacaatgaattgtcaaccattgctcgtctctacacagat
ttaccactggaaacagatgaggtggtctatggtaagggagctaagcgtgccattcctgaa
aaagaggtcttgctcagccacctggctaaaaaagtcaaggtccttcaggttgccaaaccg
gtcatgctagaaaagttagctgaacatggccaatcagagcttctctttgacatggaatta
ccattggcaaatgtgttagccaagatggaaatggctggtattaaggtcgatggacaaacc
cttaacgagatggcagtggaaaaccaagcagtcatcgacaaattgacccaagacatctac
gaaatggcgggcgaagaattcaatattaactcgcctaaacagttgggtgttatcctcttt
gaaaaaatgggtctacctttggaatacactaagaaaaccaagacaggttattcaacggca
gtggatgtccttgaacgtttggcaccaattgctccaatagtagctaagattttagagtac
cgccaaatcactaagcttcagtctacctatgtcttggggcttcaggattatatccttgag
gatggtaagatccatacccgttacatgcaagatttgacccagacaggtcgactctcatct
gtggatcctaacttgcaaaatatccccgttcgcttggagcagggtcgtctcatccgtaag
gcctttgtcccatcgactaaggacgcggtgctactaagctcggattactcacaaattgag
ttgcgcgtgcttgcccacatttcgggagatgagcatttgattgcagcctttaaggagggg
gcggatatccatacctctacagccatgcgtgtctttggtattgaaaagccagaggatgtc
acacctaacgaccgtcgtaacgctaaggctgttaacttcggtatcgtttatggtatttct
gactttggtctttctaacaaccttggtattagccgtaagaaggccaaggagtatattgac
acctattttgagcgttatcctggtattaaggcttatatggataatgtggttcgtgaagcc
aagaataaaggatatgtatcaaccctcttccaccgccgtcgtgagttaccagatatcaat
tctcgtaactttaatgtccgtaacttcgcagagcgaacagccataaactctcctatccaa
ggaagtgctgctgatatcctcaagattgctatgattaacttagacaaggctctggtagaa
ggtggctataaaaccaagatgctcctccaagtacacgatgaaatcatccttgaggtgcca
agagacgaacttttagctatgaaagctttggttaaagaaaccatggaagctgcagtagaa
ctcgctgtcccactcatcgcagatgaaaatgagggctgtacatggtatgaggcaaagtaa
DBGET
integrated database retrieval system
