Streptococcus thermophilus S9: AVT04_06485
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Entry
AVT04_06485 CDS
T04785
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sths
Streptococcus thermophilus S9
Brite
KEGG Orthology (KO) [BR:
sths00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sths03400
]
AVT04_06485
Enzymes [BR:
sths01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVT04_06485
DNA repair and recombination proteins [BR:
sths03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AVT04_06485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ALX91442
LinkDB
All DBs
Position
1195914..1199234
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AA seq
1106 aa
AA seq
DB search
MKLLYTDMSQDLTEILTEQASSYAQKGKRVFYIAPSALSFEKERKVLEYLPQSASFDITV
TRFTQMARYFILNTSNPKTQLDDTGLAMIFYKVLLHMGDDELKVYGRLRKDSNFINQLVD
LYKELQQANMTVLDLQHLDQVEKQEDLVRIFSAAQDLLLAGDFDNQSKLSAFFKEITSGH
LDEALSNTVLVIDGFTRFSAEEEALVALLNDKCHQIVVGTYTSQKAYKANFVYGNVYQAS
VDFLRTLAQTYKVIPDYVTTDKEGNLSFARISRLLESRHDFSTVDETVTEQDKHALKVWE
VVNQKEEVAQVAKSIRQLLADGKRYKDILVLLGDEESYKLHVGQIFRKFDIPYYFGKEES
MSSHPLVEFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQEDLDLFEYYVNFADIKGRHK
FLSDFTANSRDKYNLDQINALRSQLIEPLDKFLNSRKQKGSSLLKKLVVFLEAVQLPSQM
FELSTKASEAEKEQNEQVWKAFTHILEQVETIFGDESLSVDDFLSILRSGMLACDYRTVP
ATVDVVNVKKYDLIQPHSAPYVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEHRRL
DIVTQINSKRGHFVAMSLFNAASEQLVLSQPQIINESQDDMSVYLKELLDLGIPLVEKGR
NRFEAKGDQIGNYRDLLSTVIALNSSHLDLDLDKETQTFWSVAVRYLRKRLDKDQVLIPK
VIDDVTTTKVDDQVMQLVFPEEEPLKLSATALTTFYNNQYLYFLRYVLELEELESIHPDA
RHHGTYLHRVFERVMGDSSSESFDDKLEKAIAQTNQDQPFEILYTEDQESRFSRQILEDI
ARSTASVLRDNAAVKVECEEVKFDLLLANSIKITGIIDRVDRLTDGALGVVDYKTGKNVF
DIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQVPQLNLSQIGLEKLAAQAHK
ELTYKGLFVASETEHLTGGNYDLQKTVTYDKEDLETLLDYNIKLFRSAAEVIRSGNFAIN
PYTEDGKSVQGDQIKSITHFEADRHMGQARKLLRLPKKGKKEAYLELMAKTEEENQMQVS
ENTISFPVIDHAVRVDKKDQEDNHVD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactttatacggatatgtctcaggatttaacagaaattctgacggagcaggcg
tctagctatgctcaaaaggggaagagggttttttatattgctcctagtgccctgtccttt
gaaaaggagcgaaaggttttagaatacctgcctcagtcagcatcttttgacattacggtg
actcgttttactcagatggctaggtattttattctcaatacgagtaacccaaagactcag
ttggatgatacaggtttggccatgattttttataaagtgttgttgcacatgggagatgat
gagctcaaggtctatggccgtttgcgtaaggatagcaactttattaatcaattagtggac
ctttataaagagttgcagcaggccaatatgacagtattggatttgcagcatttggatcag
gttgaaaaacaagaggatttggtaaggattttcagtgcagctcaggacctcttgttggca
ggagattttgacaatcaatcaaagcttagtgccttctttaaggaaattacctcagggcat
ctggatgaggccttgagtaacacagttttggtcattgatggttttacccgtttctcggct
gaggaggaggctctggttgcactcttgaacgacaagtgccaccagattgtagtggggacc
tatactagtcaaaaagcttataaggccaattttgtttatggcaatgtttatcaagcctca
gtggatttcttgaggactttggctcagacctataaggtgatacccgactacgtgacgaca
gacaaggagggcaatctttcttttgcgcgtattagtcgtcttttggagagccgtcatgac
tttagtacggtagatgagacggtaactgagcaggataagcatgccctgaaggtttgggaa
gtggtcaaccagaaagaagaagtggcccaggttgccaagagtattcgccagttgctggca
gatggcaagcgttacaaggatattttggtcttgcttggtgacgaggagagttataagctt
cacgtggggcagattttccgaaaatttgatattccttattatttcggtaaggaagaaagc
atgtctagccatcctttggtggagtttgtggattcgctagagcgtatcaagcgctataac
taccgtgctgaggatttgcttaaccttgtaaaatccggtctctatggtggttttgctcaa
gaggatttagacctttttgagtattatgtcaattttgcggatatcaaggggcgtcataaa
ttcttgtctgattttacagctaatagtcgtgataagtataatttagaccagatcaatgcc
ttgcggtcacaattgatagagcccttggacaagtttcttaatagtcgcaaacaaaaggga
tctagtctactcaagaaactggtggtctttttagaggctgtgcaactaccaagtcagatg
tttgaattgtccaccaaggccagtgaagctgaaaaagaacagaatgaacaggtttggaag
gctttcactcatatcttggagcaggttgagactatctttggagacgaatcgctctcagtg
gacgactttttgtctatcttgcgttcgggaatgttggcctgtgattaccgtacggttcca
gccactgttgatgtggtcaatgtgaaaaaatacgacttaatacagccacattcggctccg
tatgtttttgccttggggatgacccagtcacattttcctaaggtaggacaaaataagagt
cttttgtctgatgaggagcgtagtcgtatcaatgaggcgacggatgagcacaggagattg
gatattgttacgcagatcaatagtaagcgaggtcattttgtggctatgtcgcttttcaat
gctgctagtgaacaattagtgcttagtcagccacaaattataaatgaaagtcaagatgac
atgtctgtttatttgaaggagcttcttgaccttggtattccattggtggaaaagggacgc
aatcgtttcgaagcaaagggggaccagattgggaactatagagaccttctgtcgactgtc
attgcccttaacagtagtcatttggatcttgacttggacaaagaaacccagactttctgg
tcggttgctgtacgctatctccgtaagcgacttgataaggatcaagtcttgattccaaag
gtgattgacgatgtgacgacaaccaaggtggacgatcaggtcatgcagttggtctttccg
gaggaagaaccactgaaattatcagctacagctctgacgaccttctataacaaccaatat
ctttatttcttgcgttatgttttggaacttgaggagctagagtctatccatccggatgct
cgacaccacgggacttatttacaccgagtctttgagcgtgtgatgggtgattcgtcatca
gaaagcttcgatgataaattggaaaaggccattgctcagaccaatcaggatcaacctttt
gaaattctctataccgaggaccaagagagtcgtttctctcgtcagattttggaggacatt
gcgcgttcaactgccagtgttctacgtgacaatgcggcggttaaggttgagtgtgaggaa
gtcaagtttgacttgcttttagcaaatagcatcaagattactgggattattgaccgagtg
gaccgtttaacagatggtgctctgggtgttgttgactataaaacaggtaaaaatgtcttt
gatattcagaaattctacaatggcctcagtccgcaattggtgacctatctggaggctctc
cgtcaaacctataaggttgatgctgatcaactttttggggctatgtatcttcacatgcag
gtcccacagcttaacctatctcagattggtttggaaaagctagcggctcaggctcataag
gaattaacttataagggactttttgtggcttcagaaacggagcatttgactggtggaaac
tatgatctgcaaaagactgtcacctatgacaaggaggatttagaaaccttgttggactac
aatattaagctctttaggagtgctgctgaagttattcgaagtgggaattttgcgatcaat
ccttatactgaggatggcaagtctgttcaaggtgatcaaatcaagtctattactcacttc
gaggccgaccgccacatgggacaggctcgtaaactcttgcgtttacccaaaaagggcaag
aaggaagcctatttggagttgatggcaaaaactgaggaagagaatcagatgcaagtttct
gaaaatactatctcctttccagtcattgatcatgctgtgagagtagacaaaaaagaccag
gaggataaccatgttgactaa
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