Streptococcus thermophilus S9: AVT04_06570
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Entry
AVT04_06570 CDS
T04785
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sths
Streptococcus thermophilus S9
Brite
KEGG Orthology (KO) [BR:
sths00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sths03019
]
AVT04_06570
03009 Ribosome biogenesis [BR:
sths03009
]
AVT04_06570
Enzymes [BR:
sths01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AVT04_06570
Messenger RNA biogenesis [BR:
sths03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AVT04_06570
Ribosome biogenesis [BR:
sths03009
]
Prokaryotic type
rRNA helicases
AVT04_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ALX91457
LinkDB
All DBs
Position
1216448..1217791
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AA seq
447 aa
AA seq
DB search
MSFKDFNFKDYIQEALDEIKFKEPTPVQQKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF
EKLNPESRDVQVVITAPSRELATQIYQSTKQIAKHSDTEIRVVNYVGGTDKQRQIEKLKV
AQPHIVIGTPGRIYDLFKSGDLAIHKAHTFVVDEADMTMDMGFLATVDKIAASLPKEVQI
LVFSATIPQKLQPFLKKYLTNPVMEQIKTSTVIADTIDNWLVSTKGRNKNGQILEMLKGM
QPYLAMIFVNTKERADDLHSYLVSNGLKVAKIHGGIPPRERKRIMNQVKKLEFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKM
GITFEPKVFKDGEFQDTYDRDRRANREKAYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKV
DEKRKRERRAANRAKGRAERKAKKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattttaattttaaagactatattcaagaggctctcgatgagattaaa
tttaaggagccaacacctgttcagcaaaaattgattccagtagtccgttctggccgtgat
ttagtgggtgaatcaaagactggttcagggaagacacataccttcctattgccaattttt
gagaagcttaatccagagagcagggatgttcaagttgttatcacagctccatcgcgtgaa
ttggcgacacagatatatcagtcgacaaaacagattgccaaacactctgatacagaaatt
cgtgttgttaattacgtcggtggtacggataaacaacgtcagatcgagaaacttaaggta
gcccaaccgcatatcgttatcggaacaccagggcgtatttatgacctgtttaagtctggt
gacttggctatccacaaggcacatacttttgtcgttgacgaggccgacatgaccatggat
atgggattcttggctactgtggataagattgcggcaagtcttcctaaggaagttcaaatt
ttggtcttctcagcaaccattcctcaaaaattacaaccattcttgaagaaatatttgacc
aatcctgtcatggaacaaatcaagacttcaacggtgattgcggataccattgataactgg
ttagtatctaccaaggggcgcaacaagaatggacaaattcttgagatgcttaaggggatg
cagccatacttggcaatgattttcgttaataccaaggaacgtgcggatgatttacacagt
tatttggtatcaaacggtcttaaagtagcgaaaattcatggcggtattccaccacgtgaa
cgtaagcgtatcatgaatcaagttaaaaagcttgaatttgagtatattgtagcgactgac
cttgcagcgcgtggaattgatattgaaggggttagccatgttatcaatgacgctattcct
caagatttgtcattctttgttcaccgtgtaggacgtactggacgtaacggcttgtcagga
acagcaatcaccctttatcaaccaagtgacgactcagatattcgtgagcttgaaaagatg
gggatcacctttgaacctaaggtctttaaagatggtgagttccaagatacctatgaccgc
gaccgtcgtgccaaccgagaaaaagcctatcaaaaacttgacacggaaatgattggtttg
gttaagaagaaaaagaaaaaaatcaagcctggttacaagaagaaaattcagtggaaggtt
gacgaaaaacgcaaacgtgaacgtcgtgcagccaatcgtgctaagggacgtgctgaacgt
aaagctaagaagcaaagcttctaa
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