Streptococcus thermophilus S9: AVT04_07960
Help
Entry
AVT04_07960 CDS
T04785
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sths
Streptococcus thermophilus S9
Brite
KEGG Orthology (KO) [BR:
sths00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sths03400
]
AVT04_07960
DNA repair and recombination proteins [BR:
sths03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AVT04_07960
Archaeal homologous recombinant proteins
AVT04_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_29
SpoIVA_middle
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ALX91704
LinkDB
All DBs
Position
1495354..1498533
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN
VEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIDRVLQQERAKQGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEERLRQSNKDMDKRQAQLDSHFASQVWSEEELAVLASTPASEKLARL
EEFLSQRQESLTEQKSILKAAHEDLAQLQKSLQTAQDLAKIFQELEQAKERYRLEIEEGA
QGQAEAKVHLEELQFAQGLQETIRTLKQYRKQLMQLEQDLEIAQEALSEKQQAFEDVKAK
KEELTVQSKDFLQKEEELETWKENIIYAQSLAQEQEKIKRSTTNYKQLEETYQQARKEVE
MLNKSLSDLEANRLSLDSLHEAEKLFQIVGYSVENQLAQDLKEIENLNQELTKTEKRHQT
LSFDIDQAQEILKELEEELRRTLVSRRQLMIVQLQAELEEGHPCMVCGALEHPNVGGAQA
DEVALKNLMDQVEKLQAQKEKQVATLSNRQATLSEVASKRQDLLDQVAKVKATLEKHYQE
LEEHVKGRFDFDFSIDYETDRGQALLLKVEQYYQELQKRYDKEETDYIRYQDELGKAQKK
ATDLAKTYQEAKAVLDQAQERLEDLQEAHPELESVEVYQERISLAHQELNLYNKQVKENS
EAYNQLHADIKGIKGQIESITKSKDKVNQDVKRLSAELEQSLKAEGALANDLEQVELWLI
EVNNQAIPMLQAKLTTYATLKQELQAQIRKGQELLQNQEQPDLDSLAQAVQNCQEIYDRQ
LAQFSVMEKGLKDATATYQAAKTLQDSNQEAFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAISVLEQIGE
NRMVGVISHVDDMKEGIAQQLVIIKLHDGSSRIKIVDKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtccagttagaattgaccaattttggaccatatcgtaaggaagttattaat
ttcactcagtttgaccatgctcccctctttttgattggaggggacacaggggctggtaag
agtactctctttgatgccatgacggtagccttgtttgctacgaccagtggtgatcgtaat
gttgaggagatgcggtcaactttcgctggtccagaggatgatttgaccaaggtgactttc
tatttccaacaaggcaatcacctttatcgcattgaccgagttctccagcaagagagggcc
aagcagggtgggggcactaccatgcaaaaggcgacggcttctctagtcattgtggataag
attggtggtcaggaaattgaaaagcttggggataagatcaaggaagtgagtgaccagatt
gagcagattttggggctcaatgctgagcagttcaaacagattatcctcttaccgcaaaat
gattttagtcgttttttgaaggaagattccaagactaagactcaaattttaaagaaaatc
tttgggacaggtatctttgaccgttttcaaaagagtttggaagagcgtcttcgtcagagc
aataaggatatggataagcgtcaggctcagctagatagccactttgccagtcaggtttgg
tcggaggaagaattagctgtcttggcgtcaacgccagcctctgaaaaattggcacgtctt
gaagagtttttgtctcagcgtcaagaaagtcttacagagcaaaaaagtatcttgaaggct
gcccacgaggatttggcacaactgcagaagagcttgcaaactgcccaagatttggcaaag
atttttcaagaattggagcaagccaaggaacgttaccgtctggaaattgaggagggggct
caaggacaggcagaggcaaaagtgcatctggaggaattacagtttgctcaaggtctgcag
gaaaccattcggaccttgaagcagtatcggaaacagttgatgcaattagagcaggacctt
gaaattgctcaagaagccttaagtgaaaagcaacaggcgtttgaggatgttaaggctaaa
aaagaggaactcacagttcaatctaaggattttcttcaaaaagaagaggagcttgaaact
tggaaagagaatattatctatgcccagagtcttgcccaagaacaggagaaaatcaaacgt
tcaacgactaactacaagcagttggaagagacctatcagcaggctagaaaagaggttgag
atgcttaacaagtccttgtctgacttggaggctaatcgtcttagtttagatagtttacat
gaggccgaaaaactcttccagattgtgggctacagtgtggagaatcaacttgctcaggac
ctgaaagaaatagagaacttgaatcaggagttgacaaagaccgaaaaacgtcatcaaacg
ttatcttttgatattgatcaagctcaagaaattctcaaagaattggaagaggagttaaga
aggactttggtttcacgccgtcaactcatgattgtccaactgcaggcagagttagaggag
gggcatccttgtatggtttgtggtgctctggaacaccctaatgttggtggagcacaggct
gatgaagtggccttgaaaaatctcatggatcaggtggagaagcttcaagctcaaaaagaa
aagcaagtcgctactttatcaaatcgtcaggctaccttgagtgaagttgcatctaaacgt
caggatttgcttgaccaagtggctaaagtcaaggcaactcttgaaaagcactatcaagaa
ttagaagagcacgttaagggacggtttgattttgatttttcgatagactatgaaactgac
cgtgggcaagccctactcctgaaggttgagcagtattatcaagagttacaaaaacgttat
gataaggaagagacagattatatccgatatcaagatgagctaggtaaggctcaaaaaaaa
gcgacagatttggctaaaacctatcaagaggccaaggcagtgcttgaccaagctcaagaa
cgcctagaggacctgcaggaagctcatccagaacttgagtctgttgaggtatatcaagaa
cggatttcccttgctcatcaggagctgaacctctacaataagcaagtcaaggaaaatagc
gaagcctacaaccaacttcatgccgacattaaaggaatcaaggggcagattgagagtata
actaagtctaaagataaggtaaatcaagatgttaagcgattatctgctgaattagagcaa
agtctcaaggctgaaggagccctcgctaatgacttagagcaggtcgaactctggcttatt
gaggtaaataatcaagctattcctatgcttcaggccaaattaacgacctatgcaacgctc
aaacaagaattacaggcgcagattcgtaaggggcaagagcttctccaaaatcaagaacaa
ccagatctcgatagtctagcgcaagcagtacagaattgtcaggaaatctatgataggcag
ctcgctcagttttctgtcatggaaaagggacttaaggatgcgacggctacctaccaagcg
gctaaaacccttcaagacagcaaccaagaggcctttaaggcccaccaagaactcagtgat
ttggttaaggtggttaagggagaaaatactgctctaactggtcgtcttaatcttgaggtc
tacgttatccgtcagtatttccaacaaatcttggactatgccaatgctaactacatcgga
ctattaacggataaccgctattcctttgttctaagtgaggaaggacgcagggcgcgtgat
cacttcggtttggatatcaatgtctatgaccagctgacaggtagtgaacgctccgttaaa
tccttgtctggtggtgaaacctttatcgctgcactggccattgccctatccctctcagaa
gttgtccaaaataccagcaagggtgccgttgttgaagcactcttcatcgatgaaggattt
ggctcactggataaggaagccctgaccaaggccatttctgttctggaacaaatcggtgaa
aaccgcatggtcggtgtcatcagtcatgtggacgatatgaaagaaggtattgctcagcaa
ctagttatcatcaagttgcacgatggcagtagccgtattaaaattgtggataaggggtag
DBGET
integrated database retrieval system
