Streptococcus thermophilus S9: AVT04_08720
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Entry
AVT04_08720 CDS
T04785
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sths
Streptococcus thermophilus S9
Pathway
sths03410
Base excision repair
sths03430
Mismatch repair
sths03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sths00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AVT04_08720
03430 Mismatch repair
AVT04_08720
03440 Homologous recombination
AVT04_08720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sths03400
]
AVT04_08720
DNA repair and recombination proteins [BR:
sths03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AVT04_08720
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AVT04_08720
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AVT04_08720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ALX91838
LinkDB
All DBs
Position
1647524..1649734
Genome browser
AA seq
736 aa
AA seq
DB search
MITSTYDWKINTKEPDAGFFKLAKEHGLVKTAAKIAYERGIRTEEALEDFLKADLSHLHD
PYLLHDMDKAVARIRQAIENYEQILVYGDYDADGMTSASIVKEALEMMGAEARVYLPNRF
TDGYGPNESVYKYFIEQEGISLIITVDNGVAGNEAIAYAQEQGVDVIVTDHHSMPSQLPE
AYAIVHPEHPGADYPFKYLAGCGVAFKIATALLETIPTEMLDLVAIGTIADMVSLTDENR
IMVKVGLEILKTTERIGLQELLRISEVDLTTISEETVAFKLAPQLNALGRLDDPNPAIEL
LTGFDDEEAQAIALEINAKNEERKEVVQNIFDEAMSMVDLDKPVQVLAKEGWHPGVLGIV
AGRIMEQISQTVVVLNIEDGLARGSARSLESINIFHALDDHRDIFTAFGGHAGAAGMTLP
EENLTQLSDILCSYVYDNDIDTGAKNTLNLDEELQLGELSLDTIRSLEKLAPFGMDNKKP
VFWLHDITVTQARTMGQNGAHLKFKVKQGKASFDVVAFNKGHLLQEFQQAQGLELAVTLS
VNVWNGQTTLQLMLADVRVDNVQLFDFRSKNMVLPEGLPTVEEASDEATAVVLDTLPNSE
TELKEWFDGKEFQAIYFKNRIKEAYYLTGYGTREQFARLYKTIYQFPEFDVRYKLDDLSH
YLKIDKILLIKMIQIFDELGFVTIDNGVMTVNKEAGKRDIEESKIFQDLKRLVKFQELMA
LGTPQEIYDWLYNQEQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattacatcaacgtatgattggaaaataaacacaaaagagccagatgctggctttttt
aaacttgctaaagaacatggactggtaaaaacagcagccaagattgcctatgaacgtggc
attaggacagaagaggcacttgaagactttctaaaggcagatttatcgcaccttcatgat
ccttatctgcttcatgatatggataaggcagtggctagaatccgtcaggctattgaaaat
tatgaacaaatcttagtatatggagattacgatgcggatggtatgacgtcagcctcgatt
gtcaaagaagcccttgaaatgatgggagctgaagctcgagtatacttgccaaaccgtttt
acagatggttatggaccaaacgaaagtgtctataagtatttcattgagcaggaaggtatt
tcactcatcattacagtggataatggggtagctgggaatgaggctatcgcttatgcgcaa
gagcaaggtgtggatgttatcgtcacagaccaccatagcatgccgtcacagcttccagaa
gcttatgccattgttcatccagaacatccaggtgctgattatccctttaagtatttggca
ggttgtggagtagctttcaaaatagcaacggccctcctcgagaccataccaacagagatg
ttggatttggtagctatagggactattgctgatatggttagcctgaccgatgaaaatcgt
attatggttaaggttggacttgaaattctcaagactactgagcgtattgggcttcaagaa
ttgctccgtatttccgaagtagacctaacaacaatttctgaagaaacagtggctttcaaa
ctagcccctcaactcaatgccttaggacgtttagacgatccaaacccagctattgaacta
ttaaccggatttgacgatgaggaagcgcaagccattgctctggaaatcaatgccaaaaat
gaagaacgtaaggaagttgttcaaaacatctttgatgaagccatgagcatggtagacttg
gataaaccagttcaggttttggctaaggaaggctggcatcctggtgtactcggcattgtt
gctggccgcatcatggagcaaatcagtcagacagtagtggttttaaatattgaagatggc
ttggctagggggtcagctcgtagtttggaatctatcaatatcttccatgcacttgatgac
cacagagacatctttactgcatttggagggcacgctggagcagctggtatgacccttcca
gaggaaaatcttactcaactctcagatattttatgtagttatgtctacgataatgacatt
gatacgggtgccaaaaatacgcttaatttagacgaggagctacaactcggtgagcttagc
ttggataccataaggagcctcgaaaaactagcaccttttggtatggataataaaaagcca
gtcttttggctacatgatattaccgttactcaagctagaactatggggcaaaatggagct
catcttaagtttaaggttaagcaaggcaaggctagttttgatgttgtcgcctttaacaaa
gggcatctgcttcaagaatttcagcaagctcaggggttggaattagcagtgacgctgtcc
gttaatgtatggaatggccagacaacactacagctcatgttggcagatgtgcgcgtggac
aatgttcagttatttgattttcgctcaaaaaatatggtactacctgagggcctaccaact
gtagaagaggcctcagacgaagcaactgcagttgtcctcgacaccctaccgaattcagag
acggaattaaaagagtggtttgacggtaaggaattccaggccatttattttaagaatcgc
attaaggaagcctattatctgacaggctatggaactagagagcaatttgcaaggctctat
aaaaccatttatcaattcccagaatttgatgtgcgctataaattagatgacctcagtcat
tatcttaagattgataaaattcttctcatcaagatgattcaaatttttgatgaattgggc
tttgtcactattgataatggtgtcatgacagttaataaagaggctggaaaacgtgatatt
gaggaaagcaagattttccaggaccttaaacgtcttgtcaagttccaagaactcatggct
ttgggaacaccacaggaaatttatgattggctctacaatcaggagcagtag
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