Streptococcus thermophilus S9: AVT04_09410
Help
Entry
AVT04_09410 CDS
T04785
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sths
Streptococcus thermophilus S9
Pathway
sths03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sths00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AVT04_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sths03400
]
AVT04_09410
Enzymes [BR:
sths01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AVT04_09410
DNA repair and recombination proteins [BR:
sths03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AVT04_09410
Prokaryotic type
AVT04_09410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALX91963
LinkDB
All DBs
Position
1772309..1772962
Genome browser
AA seq
217 aa
AA seq
DB search
MEHSTWHRLLKEELPNHYFSKINQFMDKVYEEETIYPPRDKVFNALLETPFEEVRVVILG
QDPYHGPNQAQGLSFSVPETIPAPPSLVNILKELGEDLGPRSHHDLTTWAEQGVLLLNAC
LTVPAGRANGHAGQIWEPFTDAVIKVLNQKDTPVVFILWGGYARKKKSLVTNPKHAIIES
AHPSPLSAYRGFFGSKPFSKANAYLVSQGQPPIDWLK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggaacattcgacatggcacaggcttctaaaagaggaattgcctaaccattatttttca
aagataaatcagtttatggacaaggtctatgaagaggaaacaatttatcccccacgagac
aaggtatttaatgctttgttagagactccttttgaagaagtccgggtggttatccttgga
caggacccttaccatggtcctaatcaggctcagggtttgtcattttcagtacctgagacg
attccagctccaccttctttggttaatattctcaaagaattaggggaggatcttggtcct
agaagtcatcatgatttaacaacttgggccgagcaaggagtgctattacttaatgcctgt
ctgactgttccagctggtcgagccaatggtcatgctggtcagatttgggaaccttttaca
gatgctgtgattaaggttctcaatcaaaaggatactccggttgtctttatactttggggc
ggctatgctcgtaagaagaaatcactagtaaccaatcctaagcatgccattattgagagt
gctcatcctagccctttatcggcctatcgcggtttttttggcagcaagcctttttcaaaa
gccaatgcttacctcgtatctcaaggacaacccccaattgattggttgaagtaa
DBGET
integrated database retrieval system
