Streptomyces sp. HU2014: M1P56_04050
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Entry
M1P56_04050 CDS
T11358
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sthu Streptomyces sp. HU2014
Pathway
sthu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sthu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M1P56_04050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthu03400
]
M1P56_04050
Enzymes [BR:
sthu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M1P56_04050
DNA repair and recombination proteins [BR:
sthu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M1P56_04050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
NAT10_TcmA_helicase
TraI_hel_assoc_N
NPHP3_N
PIF1
PhoH
AAA_16
DEAD
HTH_IclR
nSTAND3
UvrD-helicase
AAA
TrwB_AAD_bind
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UQI43597
LinkDB
All DBs
Position
942609..944816
Genome browser
AA seq
735 aa
AA seq
DB search
MAQMAVVEGVLERITYANEESGYTVARVDTGRGGGDLLTVVGSLFGAQPGESLRMEGRWG
SHPQYGRQFTVENYTTLLPATVQGIRRYLGSGLIKGIGPRIADRITEHFGTDTLDVIERE
PKRLIEVPGLGPKRTKMIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDSSISVT
RNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPDRVKAGLQYALSQSTDQGHCFLPEERL
IADAVKLLQVDTGLVIDCLAELAAEEEGVVRETVPGPDGGEPVTAVYLVPFHRAEISLAA
QLGRLLRTGEDRLAAFQDVRWDKALAWLAGRTGAELAPEQREAVRLALSSKVAVLTGGPG
CGKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYD
KDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLLVGDVDQLPSVGAGEVLRDLLAP
GSPVPAVRLTRIFRQAQESGVVTNAHRINSGTPPLTQGMTDFFFFVEEDTEEAGRLTVDV
AARRIPAKFGLDPRRDIQVLAPMHRGPAGAGTLNGLLQQAVTPARPDLPERRFGGRVFRV
GDKVTQIRNNYEKGENGVFNGTVGVVTALDTVEQRLTVRTDEDEEVGYDFDELDELAHAY
AVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKQLVVLVGSRKALGQAVRTVS
AGRRCTALDHRLAGG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatggctgtggtcgaaggggtcctggagcggatcacgtatgccaatgaggag
agcggctacaccgtggcccgcgtcgacaccgggcgcggcggcggcgacctcctcacggtc
gtcggctccctgttcggcgcgcagccgggcgagtccctgcggatggagggccgctggggc
tcccacccgcagtacggccgccagttcaccgtcgagaactacacgacgctcctgcccgcc
accgtccagggcatccgccgctatctgggctccggcctgatcaagggcatcggcccgcgc
atcgccgaccgcatcaccgaacacttcggcacggacaccctggacgtcatcgagcgggag
ccgaagcgcctgatcgaggtgcccggactcggccccaagcggacgaagatgatcggcgcc
gcctgggaggagcagaaggccatcaaggaggtcatggtcttcctccagggcgtcggcgtc
tccacctccatcgccgtccgcatctacaagaagtacggcgactcctccatctccgtcacc
cgcaaccagccctaccggctggccgccgacgtctggggcatcggcttcctcaccgccgac
cgcatcgcccaggccgtcggcatcccgcacgacagccccgaccgcgtcaaggcgggtctt
cagtacgccctttcccagtccaccgaccaggggcactgcttcctccccgaggagcggctg
atcgccgacgcggtcaagctcctccaggtcgacaccggcctcgtcatcgactgcctcgcc
gaactggccgccgaggaggagggcgtggtccgcgagaccgtgcccggcccggacggcggc
gagcccgtcaccgccgtctacctcgtccccttccaccgggccgagatctccctcgccgcc
cagctgggccggctgctgcggaccggggaggaccggctcgccgccttccaggacgtccgg
tgggacaaggccctggcctggctcgccggccgcacgggcgccgagctggcccccgagcag
cgggaggccgtgcggctcgcgctctccagcaaggtcgccgtgctcaccggcggccccggc
tgcggcaagtccttcaccgtgcggtccgtcgtcgaactggcccgcgccaagaaggccaag
gtcgtgctggccgcgcccaccggccgggccgccaagcggctcgccgagctcaccggtgcc
gaggcgtccaccgtgcaccggctcctggagctcaagcccggcggcgacgccgcctacgac
aaggaccggccgctggacgccgacctggtggtggtcgacgaggcgtccatgctcgatctc
ctgctggccaacaagctcgtcaaggccgtgccgcccggggcccatctgctgctcgtcggc
gacgtcgaccagctgccgtccgtcggcgccggcgaggtcctgcgcgacctcctcgccccc
ggcagccccgtcccggccgtgcgcctcacccggatcttccggcaggcgcaggagtccgga
gtggtgaccaatgcgcaccgcatcaactccggtacgccgcccctcactcaagggatgacg
gatttcttcttcttcgtcgaggaggacaccgaggaggcgggccgcctcaccgtggacgtg
gcggcgcgccggatccccgcgaagttcggcctcgatccgcgccgcgacatccaggtgctg
gcccccatgcaccgcggcccggccggcgccggcaccctcaacggcctgctccagcaggcc
gtcacccccgcccgccccgacttgccggagcggcgcttcggcggccgcgtcttccgcgtc
ggggacaaggtcacccagatccgcaacaactacgagaagggcgagaacggcgtcttcaac
ggcacggtgggcgtggtcaccgccctggacacggtggagcagcggctgaccgtccgcacc
gacgaggacgaggaggtcggctacgacttcgacgaactcgatgagctggcccacgcgtac
gccgtgaccatccaccgctcgcagggcagcgagtaccccgccgtggtgatccccgtcacc
accggcgcctggatgatgctccagcgcaatctcctctataccgcagtgactcgggcaaaa
cagctcgtagtgctcgtagggtcccgtaaggctctgggtcaggcggtgcgcacggtctcc
gcggggcgccgctgcacggccctggaccaccggctcgcgggagggtga
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