Streptomyces sp. HU2014: M1P56_05100
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Entry
M1P56_05100 CDS
T11358
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sthu Streptomyces sp. HU2014
Pathway
sthu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sthu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M1P56_05100 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthu03400
]
M1P56_05100 (recO)
DNA repair and recombination proteins [BR:
sthu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M1P56_05100 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M1P56_05100 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
ArfGap
Motif
Other DBs
NCBI-ProteinID:
UQI43776
LinkDB
All DBs
Position
1192003..1192749
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AA seq
248 aa
AA seq
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MSLFRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFARGGELVGRGLPLCTQSETIAAYGGAIVTDYARYTAGTAMLETAERFTDHEGEPAVQQ
YLLLVGGLRTLAAGEHAPHLILDAFLLRSLAVNGYAPSFDACAKCGMPGPNRFFSVAAGG
VVCGECRVAGSVVPSSEAIGLLGALLTGDWATADACEPRHVREGSGLVAAYLHWHLERGL
RSLRYVEK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttccgcgacgacggcatcgtgctgcgcacccagaagctgggcgaggcggac
cggatcatcactctgctcacccggggccacggccgggtccgggccgtcgctcgtggagtg
cggcgcacgaagtcgaagttcggggcccggctggagcccttctcccacgtggacgtgcag
ttcttcgcgcgcgggggcgagctggtcgggcgcgggctgccgctctgcacgcagagcgag
accatcgccgcgtacggtggcgccatcgtcaccgactacgcgcgctacaccgccggcacc
gccatgctggagaccgccgagcggttcaccgaccacgagggcgagcccgccgtgcagcag
tacttgctgctcgtcggcggcctgcggacgctcgccgcgggcgagcacgccccgcacctg
atcctggacgccttcctgctgcgctccctggccgtcaacggctacgcgcccagcttcgac
gcctgcgcgaagtgcggtatgcccggccccaaccggttcttctcggtggccgccggcggc
gtggtctgcggggagtgccgggtcgccggaagcgtcgtaccctcctcggaggcgatcggg
ctgctcggtgcgctgctgacgggcgactgggcgacggcggacgcctgcgagccacgccac
gtcagagagggcagcggcctggtcgcggcgtatctgcactggcacctggagcggggcctc
cgttcgctccggtatgtcgagaaatag
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