Streptomyces sp. HU2014: M1P56_08745
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Entry
M1P56_08745 CDS
T11358
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sthu Streptomyces sp. HU2014
Brite
KEGG Orthology (KO) [BR:
sthu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sthu03051
]
M1P56_08745 (pafA)
Enzymes [BR:
sthu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
M1P56_08745 (pafA)
Proteasome [BR:
sthu03051
]
Prokaryotic proteasome
Bacterial regulatory particles
M1P56_08745 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UQI44429
LinkDB
All DBs
Position
2006598..2007959
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDSVIELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEIQQEYYEKAVDFCERRGIRTGTV
ERVLELWGRTLEAVRDEDLDRISTEIDWVMKYQLIEQYRAKNNISMSHPRVAQIDLAYHD
IHRRRGLYYLLEKRGRAARVCNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcaccttcagggga
cagcgccggctgtcacctgacgaagtggcgcgctacctcttccgccgtgtcgtttcctgg
gggcgcagcagcaacgtcttcctgcgcaatggtgcccggctctacctcgatgtgggttcg
cacccggaatacgcaactcccgagtgcgacagcgtgatcgagctggtcacccatgacaag
gcgggcgagcgcattctcgaaggcctgctcgtcgacgccgaacggcgcctgcacgaggag
gggatcgcgggcgacgtctatctcttcaagaacaacaccgactccgcggggaactcctac
ggctgccacgagaactacctcgtggcccggcacggggagttctcccggctcgcggacatc
ctcatccccttcctggtgacgcggcagctgctgtgcggcgccgggaaggtcctccagacc
ccgcgcggggcggtctactgcgtcagccagcgcgcggagcacatctgggagggcgtcagc
tcggccacgacccgctcgcgcccgatcatcaacacccgggacgagccgcacgccgacgcc
gagcgctaccgccggctgcacgtgatcgtcggcgactcgaacatgtccgagaccacgatg
ctgctcaaggtcggcgccaccgatctggtgctgcgcatgatcgaggcgggcacggtgatg
cgggacctgaccctggagaacccgatccgggccatccgtgaggtcagccacgacatcacg
ggaagacgaaaggtgcgcctcgccagcggccgggaggcctcggcgttggagatccagcag
gagtactacgagaaggccgtggacttctgcgagcggcgcggcatccgcacgggcacggtg
gagcgggtcctggagctgtggggccgcaccctggaggcggtgcgcgacgaggacctggac
cggatctccacggagatcgactgggtgatgaagtaccagctcatcgagcagtaccgggcg
aagaacaacatcagcatgtcccatccgagggtcgcccagatagacctggcgtaccacgac
atccaccgccggcgggggctgtactacctgctggagaagcgcggccgggcggcccgggtg
tgcaacgacctcaagatcttcgagggcaagtcggtgcctccgcagaccacccgggcgcgg
ctgcgcggcgacttcatccgccgcgcgcaggagcagcgccgtgacttcacggtcgactgg
gtgcatctgaagctgaacgaccaggcgcagcggacggtgttgtgcaaggaccccttccgg
tcggtggacgaccgggtggaaaagctgatcgccgggatgtag
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