Streptomyces sp. HU2014: M1P56_23080
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Entry
M1P56_23080 CDS
T11358
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sthu Streptomyces sp. HU2014
Brite
KEGG Orthology (KO) [BR:
sthu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthu03021
]
M1P56_23080
Transcription machinery [BR:
sthu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M1P56_23080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
HTH_15
HTH_36
HTH_24
HTH_3
DUF7343
HTH_Tnp_4
MarR_2
DUF134
MarR
EutK_C
HTH_1
Motif
Other DBs
NCBI-ProteinID:
UQI47022
LinkDB
All DBs
Position
complement(5408857..5409786)
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AA seq
309 aa
AA seq
DB search
MTLAPVRDVTAPETTARESTARDVTAARDTTVARDLPTPGVAARRTPARPARRRHSHHDA
PDTAPDFARIAALPDGPARDALRQRVVRAWMPMAERLALQFRNRGETVEDLRQVAMLGLV
KAVHRYDPGRGTAFESFAVPTVVGEIKRHFRDHMWDVHVPRRVQELRNRVRTAHQELTRT
ADGRGPGVEELAAHTGMSEDEVRAGLEALGSFSTLSLDSALPGTDDGYALGDTLGAAEPG
FQLVVDRESLKPELRALPPREREILYLRFFCDMTQSRIAERLGISQMHVSRLISRTCDRL
HDRVMGRAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcgcaccggtacgagacgtgaccgccccggagacgaccgcccgggagagcacc
gctcgcgacgtgaccgctgcccgtgacacgaccgtcgcgcgtgacctgcccacccccggc
gtggccgcccggcggacccccgcccggcccgcgcgccgcaggcactcgcaccacgacgcc
cccgacaccgcgcccgacttcgcccgtatcgccgccctcccggacggccccgcccgggac
gcgctgcggcagcgggtcgtccgcgcctggatgccgatggccgagcggctcgccctccag
ttccgcaaccgcggcgagaccgtggaggacctccgccaggtggccatgctcggcctcgtc
aaggccgtccaccgctacgaccccggccgcggtaccgcgttcgagagcttcgcggtgccc
acggtcgtcggcgagatcaagcgccacttccgtgaccacatgtgggacgtgcacgtgccc
cgccgcgtccaggagctccgcaaccgcgtacggaccgcccaccaggaactcacccgcacg
gcggacggccggggccccggcgtcgaggagctcgccgcgcacaccggcatgagcgaggac
gaggtacgggccggtctggaggccctcggcagcttcagcacactctccctggactcggcc
ctgccgggcaccgacgacggctacgccctcggcgacaccctcggggccgccgagccgggc
ttccagctcgtcgtggaccgcgagtccctgaaaccggagctacgggccctgccgccgcgc
gagcgcgagatcctctacctgcggttcttctgcgacatgacgcagagccggatcgcggag
cggctcggtatctcgcagatgcacgtgtcgcgtctgatcagccgcacgtgcgaccggctg
cacgaccgggtgatggggcgggcggcgtga
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