Streptomyces sp. HU2014: M1P56_24100
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Entry
M1P56_24100 CDS
T11358
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sthu Streptomyces sp. HU2014
Pathway
sthu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sthu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M1P56_24100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sthu03000
]
M1P56_24100
03400 DNA repair and recombination proteins [BR:
sthu03400
]
M1P56_24100
Enzymes [BR:
sthu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
M1P56_24100
Transcription factors [BR:
sthu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
M1P56_24100
DNA repair and recombination proteins [BR:
sthu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M1P56_24100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
UQI47204
LinkDB
All DBs
Position
complement(5653685..5655166)
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AA seq
493 aa
AA seq
DB search
MTDTTAQLREDSRYEAVSSRDARFDGEFFFAVSTTGIYCRPSCPAVTPKRANVRFYPSAA
AAQGAGFRACRRCRPDAAPGSADWNVRADLVGRAMRLIGDGVVDREGVAGLAGRLGYSAR
QVHRQLTQELGAGPVALARAQRAHTARVLLQTTALPVTELAFASGFASVRQFNDTVRTVY
ARTPSALRAEATGPRPTAGAPTGVPLRLAHRGPYAAREIFDFLERRAVPGVEEMTGAPGA
RRYRRTLRLPYGTGITEVREPAAGTRNRWLDCRLHLADLRDLSTAVQRTRRLFDLDADPY
AVSDRLGTDPRLGPLVTARPGLRSPGAADGDELAVRAVLGQQVTVAAAVRLTGALVAAYG
KPLTAPDGTLTHLFPEPATLAAAPLDELGMPDSRRRALRALATALADGTVRLDPGVDREA
TERALLALPGIGPWTAGYIRMRALGDPDVFPPGDAGARHGLAALGAPPAAAEDWRPWRSY
ALHHLWNHAAKDD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaccacggcacagctccgggaggactcccgctacgaggcggtgagcagcagg
gacgcgcgattcgacggagaattcttcttcgccgtgtcgaccaccggcatctactgccgg
cccagctgcccggcggtcaccccgaagcgggccaacgtccgcttctacccctcggccgcc
gccgcccagggcgcgggcttccgcgcctgccgccggtgccgcccggacgccgcgcccggc
tccgccgactggaacgtccgcgccgacctcgtcggccgcgccatgcggctcatcggcgac
ggcgtcgtcgaccgcgagggcgtcgccgggctcgccggccggctcggctacagcgcccgc
caggtccaccgccagctcacccaggagctcggcgccgggcccgtcgccctcgcgcgggcc
cagcgcgcccacaccgcccgggtcctcctccagaccaccgcgctgccggtcaccgagctg
gccttcgcgtccggcttcgccagcgtccggcagttcaacgacaccgtccggaccgtctac
gcccgcacccccagcgccctccgcgccgaggccaccgggccccggcccaccgccggcgcg
cccaccggcgtccccctgcggctcgcccaccgcggcccctacgccgcccgggagatcttc
gacttcctggagcgccgggccgtccccggcgtcgaggagatgacgggcgcccccggcgcc
cgccgctaccgccgcaccctccgcctcccctacggcaccgggatcaccgaggtccgcgaa
ccggccgcgggcacccggaaccgctggctcgactgccggctgcacctcgccgacctgcgc
gacctctccacggccgtccagcggacccgccgcctcttcgacctcgacgccgacccctac
gccgtctccgaccggctcggcaccgacccccgcctcggccccctcgtcaccgcccggccg
ggcctgcgctccccgggcgcggcggacggcgacgagctcgccgtccgcgccgtgctgggc
cagcaggtgaccgtcgcggccgccgtccggctcacgggcgcgctcgtcgccgcgtacggc
aagcccctcaccgcgcccgacggcaccctcacccacctcttccccgaacccgccaccctg
gccgccgccccgctcgacgagctcggcatgcccgactcccgccgccgggccctgcgcgcg
ctcgccacggccctcgccgacggcaccgtccggctcgaccccggcgtcgaccgcgaggcc
accgagcgcgctctcctcgccctgcccggcatcggcccctggaccgccggctacatccgc
atgcgggccctcggcgaccccgacgtcttcccgccgggcgacgccggcgcccggcacgga
ctcgccgccctcggcgcgcccccggccgccgccgaggactggcgcccctggcgctcgtac
gccctgcaccacctctggaaccacgccgcgaaggacgactga
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