Streptomyces sp. HU2014: M1P56_25815
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Entry
M1P56_25815 CDS
T11358
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sthu Streptomyces sp. HU2014
Pathway
sthu00300
Lysine biosynthesis
sthu00470
D-Amino acid metabolism
sthu01100
Metabolic pathways
sthu01110
Biosynthesis of secondary metabolites
sthu01120
Microbial metabolism in diverse environments
sthu01230
Biosynthesis of amino acids
Module
sthu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sthu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M1P56_25815 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M1P56_25815 (dapF)
Enzymes [BR:
sthu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
M1P56_25815 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UQI47517
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Position
complement(6179271..6180149)
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AA seq
292 aa
AA seq
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MSTQIAFLKGHGTENDFVIVPDLDGRIELSPAAVARLCDRRAGIGADGVLRVVRSAAHPE
ARAMADEAEWFMDYRNSDGTIAEMCGNGVRVFARYLQHAGLAEAGDLAVATRAGVRHAHI
AKESAGGGITVSMGKALLPAGPVTVTVGTRSWPALHVNMGNPHAVCFVEDLADAGNLFTA
PAVAPEGAYPDGTNVEFVVDRGPRHVAMRVHERGSGETRSCGTGACAVMVATARRDGLDP
AVTGLPVTYTVDLPGGRLEIAETPDGSVEMTGPAVIVAEGVFDASWLDTVLG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacacagatcgccttcctcaagggccacggcacggagaacgacttcgtgatcgtc
cccgatctcgacggccgtatcgagctgtccccggccgccgtcgcccgtctgtgcgaccgc
cgggcgggcatcggcgcggacggcgtcctgcgcgtcgtccggtccgcggcccaccccgag
gcacgcgcgatggccgacgaggccgagtggttcatggactaccgcaacagcgacggcacc
atcgccgagatgtgcggcaacggcgtccgcgtcttcgcccgctacctccagcacgccggc
ctggccgaggcgggcgacctcgccgtcgccacccgcgccggcgtccgccacgcgcacatc
gccaaggagagcgccggcggcgggatcaccgtctccatgggcaaggccctgctgcccgcg
ggccccgtcacggtcaccgtcggcacccgcagctggcccgccctccacgtcaacatgggc
aacccgcacgcggtctgcttcgtcgaggacctcgccgacgccggcaacctcttcacggcc
cccgccgtcgcccccgagggcgcgtaccccgacggcaccaacgtcgagttcgtcgtggac
cgcggcccgcgccacgtcgccatgcgggtgcacgagcgcggctccggcgagacccgctcc
tgcggcacgggcgcctgcgccgtgatggtcgcgacagcccgccgcgacggcctcgacccg
gcggtcaccggcctgcccgtcacgtacaccgtggacctccccggcggacgcctggagata
gccgagacgcccgacggctccgtcgagatgaccggccccgcggtgatcgtcgcggagggc
gtgttcgacgcgtcctggctggacaccgtcctcggctga
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