Streptomyces sp. HU2014: M1P56_26495
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Entry
M1P56_26495 CDS
T11358
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sthu Streptomyces sp. HU2014
Pathway
sthu02020
Two-component system
sthu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sthu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M1P56_26495 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M1P56_26495 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthu03021
]
M1P56_26495 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sthu02035
]
M1P56_26495 (whiG)
Transcription machinery [BR:
sthu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M1P56_26495 (whiG)
Bacterial motility proteins [BR:
sthu02035
]
Flagellar system
Flagellar assembly proteins
Stator
M1P56_26495 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_Tnp_ISL3
UPF0122
HTH_23
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UQI47642
LinkDB
All DBs
Position
complement(6346250..6347086)
Genome browser
AA seq
278 aa
AA seq
DB search
MPQHTSGSDRAAAPPAARGPVRPPAPSTLDELWRSYKASGDERLREQLILHYSPLVKYVA
GRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDPTREIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARAVERAYATLEAALRRTPSETEVAAEMGIAVEELHAVFSQLSLANVVALED
LLHVGVDGGERLSLMDTLEDTAADDPVEVAEDRELRRLLARAINTLPEREKTVVTLYYYE
GLTLAEIGHVLGVTESRVSQIHTKSVLQLRAKLADIGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgatcgcgcggcggcgccacccgcggcgcgcggcccc
gtgcgccctcccgctccctcgaccctcgatgagctgtggcggtcgtacaaggcttcgggc
gacgagcggctgcgggagcagctgatcctccactactcgcccctcgtgaagtacgtggcg
ggccgggtcagcgtcggcctgccgcccaatgtcgagcaggcggacttcgtgtcctccgga
gtcttcggactcatcgacgccatcgagaagttcgaccccacgcgggagatcaagttcgag
acctacgccatcacccgcatccgcggggcgatgatcgacgagctgcgggcgctggactgg
atcccgcgctcggtccgccagaaggcccgggccgtcgagcgcgcgtacgccaccctggag
gcggcgctgcggcgcacgccctccgagaccgaggtggcggccgagatgggcatcgccgtc
gaggaactgcacgcggtcttcagccagttgtcgctggccaacgtggtggcgctggaggac
ctgctgcacgtcggcgtggacggcggcgagcggctgagcctgatggacaccctggaggac
accgccgcggacgacccggtggaggtcgccgaggaccgcgagctgcgcaggctgctggcc
cgcgccatcaacaccctccccgagcgggagaagaccgtggtcaccctctactactacgag
ggcctcacgctcgccgagatcggccatgtgctcggcgtcacggagagccgggtcagccag
atccacaccaagtccgtgcttcagctgagggcgaagctcgcggacatcgggcgctga
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