Streptomyces sp. HU2014: M1P56_28180
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Entry
M1P56_28180 CDS
T11358
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sthu Streptomyces sp. HU2014
Brite
KEGG Orthology (KO) [BR:
sthu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthu03021
]
M1P56_28180
Transcription machinery [BR:
sthu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M1P56_28180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
DUF7343
MarR_2
GerE
HTH_AsnC-type
PF0610-like_N
HTH_24
HTH_23
MarR
HTH_28
HTH_3
HTH_37
Motif
Other DBs
NCBI-ProteinID:
UQI47938
LinkDB
All DBs
Position
complement(6724825..6725703)
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AA seq
292 aa
AA seq
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MTITASTVATERSTAASQRFEASVGGLPYIEDATTVAPRDARELSRLFFDRLAELEEGTH
AYQYARNTLIEINLSLVRFAASRFRSRGDQMEDIIQVGTIGLIKAIDRFDLSREVEFTTF
AVPYIVGEIKRHFRDTSWSVHVPRRLQELRVELAKATGELSQELDHSPTPDELAAHLGLS
REEVVEGIVASNGYTAGSIDVPVDEGSDQVGNSFADRLGDVDPALEGVENLQALKPLVAE
LDDRDRQILRMRFGGEMTQSEIGAELGISQMHVSRLLTRILGRLRVGLLGAR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcacggcatccacggttgcgacggagcgttcgacggctgcctcgcagcggttc
gaggcatcggtcggggggctgccgtacatcgaggacgcgaccacggtggcgccacgggac
gcccgcgaactgtcgcggctcttcttcgaccggctcgccgagctggaggaggggacccac
gcctaccagtacgcccgtaacaccctgatcgagatcaacctctcgctggtgcgcttcgcc
gcctcccgcttccgcagccggggcgaccagatggaggacatcatccaggtcggcacgatc
ggcctgatcaaggcgatcgaccgcttcgacctgtcgcgggaggtggagttcaccaccttc
gccgtgccgtacatcgtcggtgagatcaagcgccacttccgtgacacgagctggtccgtg
cacgtgccccggcgcctccaggaactccgggtcgagctggccaaggccaccggcgagctc
tcccaggaactggaccactcgccgacccccgacgagctcgccgcgcacctcgggctgagc
cgcgaggaggtcgtcgagggcatcgtggccagcaacggctacaccgccggctcgatcgac
gtgcccgtggacgagggctccgaccaggtcggcaacagcttcgccgaccggctcggcgac
gtcgaccccgccctggagggcgtcgagaacctgcaagcactcaaaccgctggtcgccgag
ctcgacgaccgggaccggcagatcctgcggatgcggttcggcggggagatgacgcagtcg
gagatcggggcggagctggggatctcgcagatgcatgtgtcgcggctgctgacgcggatt
ctggggcggttgcgggtggggttgctgggagcgcggtag
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