Streptomyces sp. HU2014: M1P56_30890
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Entry
M1P56_30890 CDS
T11358
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sthu Streptomyces sp. HU2014
Pathway
sthu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sthu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M1P56_30890
09124 Replication and repair
03420 Nucleotide excision repair
M1P56_30890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthu03021
]
M1P56_30890
03400 DNA repair and recombination proteins [BR:
sthu03400
]
M1P56_30890
Enzymes [BR:
sthu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M1P56_30890
Transcription machinery [BR:
sthu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M1P56_30890
DNA repair and recombination proteins [BR:
sthu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M1P56_30890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
ETAA1
Motif
Other DBs
NCBI-ProteinID:
UQI48413
LinkDB
All DBs
Position
7333026..7334675
Genome browser
AA seq
549 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQADACRRAIAPFAELERAPEHIHTYRLTPLGLWNARAAGH
DAEQVVDALVTHSRYPVPHALLVDIAETMDRYGRLKLMKHPVHGLVLESTDRPVLEEILR
SKKVQPLVGARIDADTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELEEDGWT
LRPYQRQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGIYPHLELFDSRDWGLVVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDHERLAYATAETEEKYRYCATTATKRKVTEALVRKHRGEQTLVIGQYIDQ
LDELGEHLDAPVIKGETTNAQREKLFESFRQGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTVDQDFAAHRQRFLAEQGYAYRIVDA
DALLTGEDA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggacctctcatcgtccagagcgacaagacgctgcttctggaggtggaccacgag
caggcggacgcgtgccgccgcgccatcgcccccttcgcggagctggagcgggcgccggag
cacatccacacgtaccgcctgaccccgctcggcctgtggaacgcccgggccgccgggcac
gacgccgagcaggtcgtcgacgcgctggtcacccactcccggtaccccgtgccgcacgcg
ctgctggtcgacatcgccgagacgatggaccgctacgggcgcctcaagctgatgaagcac
cccgtgcacgggctggtgctggagagcacggaccggccggtgctggaggagatcctccgg
tcgaagaaggtgcagccgctggtcggcgcccggatcgacgccgacacggtcgccgtgcac
ccctccgagcgcgggcagatcaagcagacgctgctcaagctgggctggcccgccgaggac
ctcgcgggctacgtcgacggcgaggcgcacccgatcgagctggaggaggacggctggacg
ctgcgcccgtaccagcggcaggccgtggagggcttctggcacggcggctcgggcgtcgtc
gtgctgccctgcggcgccggcaagacgctggtcggcgcgggtgcgatggcgcaggccaag
gcgaccacgctgatcctcgtcaccaacaccgtctcggcgcggcagtggaagcacgagctg
gtgaagcggacgtccctgaccgaggacgagatcggcgagtactcggggacgcggaaggag
atccgcccggtcaccatcgccacgtaccaggtcctcacgaccaagcggaagggcatctac
ccgcacctggagctgttcgactcccgggactggggcctggtcgtctacgacgaggtgcac
ctgctgccggcgccggtcttcaagttcaccgccgacctccaggcgcgccgccgcctcggt
ctgacggccaccctcgtgcgcgaggacggccgcgagtcggacgtcttctcgctgatcggc
ccgaagcgcttcgacgccccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtcgaggtccgggtgaacctcacggaccacgagcggctggcgtacgcgacggcg
gagaccgaggagaagtaccgctactgcgcgacgaccgccaccaagcggaaggtcacggag
gcgctggtgcgcaagcaccggggcgagcagacgctcgtcatcggccagtacatcgaccag
ttggacgagctcggcgagcacctggacgcgcccgtcatcaagggcgagacgacgaacgcg
cagcgggagaagctcttcgagtccttccggcagggcgagatctcggtcctcgtcgtctcg
aaggtcgcgaacttctcgatcgacctgccggaggcgacggtcgccatccaggtgtccggc
acgttcggctcccgccaggaggaggcgcagcggctcggccgggtgctccgcccgaaggcg
gacgggcacgaggcccgcttctactcggtggtcgcccgcgacacggtcgaccaggacttc
gcggcgcaccgccagcgcttcctggccgagcaggggtacgcgtaccggatcgtggacgcg
gacgcgctgctgaccggcgaggacgcgtag
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