Sphaerobacter thermophilus: Sthe_0835
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Entry
Sthe_0835 CDS
T01128
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sti
Sphaerobacter thermophilus
Brite
KEGG Orthology (KO) [BR:
sti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sti03019
]
Sthe_0835
Messenger RNA biogenesis [BR:
sti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sthe_0835
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GFIT
Motif
Pfam:
HD
HDOD
Cas3_HD
YfbR-like
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ACZ38272
UniProt:
D1C205
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All DBs
Position
1:complement(925848..926855)
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AA seq
335 aa
AA seq
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MQHYALDFATLVVGQVVEGIALAFRVERRHKKSGEPFLEFGLRDLERREVRAVKWDVVDG
EEYSCPRLLYLTATVREYQGKRELHVTECAEHDGDITPYLPGPYRDDNRAVFYALADSIR
DPGLAALVKRAVNTFPGFLMSPASARNHGAYREGLLEHSVNVARISDTAASLYNGAVDRD
LLIAGALLHDIGKVGLHPVDAPDQVHPDARLLGHVVRGIRMVEQLLSTADDIDEERRAGL
LHLIASHHGQPEWGAAVRPATIEAWILHYADQLDASVTGARDVLRAASPNEAWVWFPMRE
SRLRVPPTNGASDPDGQDEPDTALSYLDDSEDVPF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacattacgcgctggacttcgccacccttgtggtggggcaggtcgtcgagggcatc
gcgctcgccttccgtgtggaacggcgacacaagaaatccggcgaaccgttcctggagttc
gggctgcgcgacctagagcgccgtgaggtacgcgccgtcaagtgggacgtcgtggacggc
gaggagtactcctgcccacggttgctgtatctaacggccaccgtcagggaatatcagggg
aaacgcgaactgcacgtcaccgagtgcgctgagcacgatggcgacatcaccccttacctg
cccggcccctatcgggacgacaaccgcgcggtgttctatgctcttgcggacagcatccgc
gaccccggcttagccgccttggtgaagcgtgcggtcaacacgttccccggtttcctgatg
tcaccagccagcgccaggaatcacggcgcctaccgcgagggcctgctcgagcacagcgtc
aacgtcgcgcgtatcagcgatacggccgcatcgttgtacaacggcgcagtcgatcgcgac
ctgctcatcgccggggcgttgctccacgacatcggcaaggtcggcctgcacccggtcgac
gcgccggatcaggtgcacccggacgcaagactcctcggtcacgttgtccgtggcatccgc
atggtcgaacaactcctctcgacggcggatgacatcgacgaggaacggcgagcagggctc
ctgcacctcatcgcgagccaccacggccagcccgagtggggtgccgccgtgcgcccggcc
acgatcgaagcctggatcctgcactatgccgaccagttggacgcaagcgttacaggcgcc
cgcgatgtgctgcgcgcggccagcccgaacgaagcgtgggtgtggttcccgatgcgagag
tcccggcttcgggttcctcccaccaacggagcgtccgacccagacggacaagacgagccg
gacacggcgctcagctatctggacgattctgaggacgttccgttctga
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