Sphaerobacter thermophilus: Sthe_0940
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Entry
Sthe_0940 CDS
T01128
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sti
Sphaerobacter thermophilus
Pathway
sti03030
DNA replication
sti03430
Mismatch repair
sti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sthe_0940
03430 Mismatch repair
Sthe_0940
03440 Homologous recombination
Sthe_0940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sti03032
]
Sthe_0940
03400 DNA repair and recombination proteins [BR:
sti03400
]
Sthe_0940
Enzymes [BR:
sti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sthe_0940
DNA replication proteins [BR:
sti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sthe_0940
DNA repair and recombination proteins [BR:
sti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sthe_0940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACZ38377
UniProt:
D1C2B0
LinkDB
All DBs
Position
1:1037470..1039446
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AA seq
658 aa
AA seq
DB search
MAAGSEARDDPYAGLRQRAYLFLRERDGAVPEEELIEHVFGSSGNPALWRPLLRQVLGAD
DRLDLRADGYWALRGTAPVSNGLLPTDFVVIDIETTGLRPLRQRIIEVAAIRYRGGRRQG
VFSTLVNPERPVPAYIRKLTGIDETALAGAPVFRRVADELTAFLGDDLLIGYNVEFDIAF
LNAELKRLGRPPLINPRLDLLPLSTQLIPGMRRSGLDAACLALGLEFRERHRAEADAALT
ALLLARLGELARERGLTTFDGLQRAAATRVPVPKRRGPVGRGRAVLDRSHLEGIPHAPGV
YLMYGARERVIYVGKAKDLRNRVSSYYSQPLGYTRKMDGLLESIERIEVVETGSELEALL
LEAQFIRRYRPQYNTQMRNNEAYPYIKIDIGNPWPRVTLTRQRADDGAVYFGPFRVARSA
RETVDLINEVFPLRTCARSFRTARSYGSPCLRLSLGQCLGPCTGMVDRDAYRQAVQDVIG
FLRGGRDEVMARLHQELVACAERLDFERASRLRDRIRRVQQLVLSQQLLAETEQRGTVLI
VTPSPESGAREFLLVVRGRLWAQIRAAAGATDDDVAARLARSWERAQQTTMPAVDQDSLD
QVHLLGRWLRKYAGHRAIIPLDAVPNWVALVAQGRALTDDELSFDSRPAPVSEEPLPA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggatcagaggcgcgggacgatccctacgcgggtttgcggcagcgggcatac
ctgttcctgcgcgaacgggacggcgcggtgcctgaagaggagctcatcgagcacgtcttt
ggctcgtccggcaacccggcgctgtggcgtccgctcctgcgacaggttctgggcgcagac
gaccggctcgacctccgcgctgacggatactgggcgctgcgcggcaccgcaccggtcagc
aacggcctgctccccaccgacttcgtggtgatcgacatcgagacgaccgggctgcgtccg
ctgcgccagcgcatcatcgaggtggccgcgatccgctatcgtggtggcagacggcagggt
gtcttttccaccctcgttaacccggagcgcccggtgccggcatatatccgcaagttgacc
ggcatcgatgagacggcgttggcaggtgctcccgtcttccgccgggtggcggacgaactg
actgctttcctcggagacgacctcctcatcggctacaacgtcgagttcgacatcgctttc
ctcaatgccgagctgaagcggctcgggcggccgcctttgatcaaccctaggctcgacctg
ttgcccctgtcgacgcagttgatcccggggatgcggcgctcgggcctcgacgccgcgtgc
ctggcgctcgggttggagttccgcgagcgtcaccgggccgaggccgacgcggcactgacg
gcgttgttgctggctcggttgggggagttggcgcgggagcgggggctgaccaccttcgac
ggtctgcagcgcgccgctgccacgcgggtgccggtgccgaagcggcgtggtccggttggg
cgcggaagggcggtgcttgatcgttcgcaccttgagggtatcccgcatgcacccggcgtg
tatctgatgtacggcgcgcgggagcgcgtgatctacgtcggcaaggccaaggatctgcgc
aatcgggtgtcctcttactactcgcagccgctcggctacacgcgcaagatggacgggctg
ctggagtcgatcgagcggatcgaggtggtcgagaccggttcggagctggaggcgctgctt
ctggaggcgcagttcatccggcgctaccggccgcagtacaacacccagatgcggaacaac
gaggcgtacccgtacatcaagatcgacatcgggaacccgtggccgcgggtgacgctgacg
cgccagcgcgcggacgacggcgcggtctacttcggtccgttccgcgtggcgcgctccgct
cgtgagacggtcgatctcatcaacgaggtgttcccgctccgaacctgtgcacgttccttc
cgtaccgcacgcagctacggttcaccctgcctccggctgtcgttaggccaatgcctgggc
ccctgcaccgggatggtggaccgggacgcctatcgccaggcggttcaggacgtgatcggg
ttcctccgcggcgggcgggacgaggtcatggcgcggctgcatcaggagctggttgcgtgc
gccgagcggctggacttcgagcgtgccagccgcctgcgggaccgcatccggcgggtgcag
cagctggtgttgagccagcaactcctggcggagaccgagcagcgcggcacggtgctcatt
gtcacgccgtcgccggaatccggggcgcgggagttcctgctcgtggtgcgggggcgactc
tgggcgcagatccgggccgcggccggcgccacggacgacgacgtggcggcgcggctggcg
cgcagttgggagcgcgctcagcaaacgacgatgcctgctgttgatcaggattcactcgat
caggtgcacctcctcggtcgctggctccgcaagtacgctgggcaccgcgcgattatcccg
cttgatgccgtgcccaactgggtcgcgctcgtcgcgcagggtcgcgcacttactgatgat
gaattgtcgttcgactcacgtcccgctcccgtttcggaggagccgctccccgcgtga
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