Sphaerobacter thermophilus: Sthe_1260
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Entry
Sthe_1260 CDS
T01128
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sti
Sphaerobacter thermophilus
Brite
KEGG Orthology (KO) [BR:
sti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sti03016
]
Sthe_1260
Enzymes [BR:
sti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sthe_1260
Transfer RNA biogenesis [BR:
sti03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sthe_1260
Prokaryotic type
Sthe_1260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ACZ38695
UniProt:
D1C378
LinkDB
All DBs
Position
1:1392574..1393473
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AA seq
299 aa
AA seq
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MDLHGFLVVDKPRGVTSHDVVALVRRRLRMRRVGHAGTLDPAASGVLVVAAGAATRLIDR
VQDGEKQYVAHIVLGAETDSADAEGRLISAAPAYVAAPSLMTIEQALTPLIGTISQVPPA
HSAIKVGGQALYHRARRGEQVEVPARTVTVHSIRVLAYDYPDLLLAIDCGKGVYVRSIAR
DLGRALGTGAYLHALLRTAVGQFTLGQAWTAAEIEELLEPHTWPLMALHPDVALSHAPAL
ILDRDAVTAWYHGRPVPTGRRPPDAAVEARVYDQDGSWLGVATADAERRRWRPRQVVAH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatctccacggcttcctggtcgtcgacaagccacgcggcgtcacatcgcacgacgtc
gtcgccctggtgcgacgcaggctacgtatgcgccgcgtcggccacgccggcaccctggac
cctgccgcgtccggcgtcctcgtcgtcgccgcgggcgcagcgacccggctgatcgaccgc
gtccaagacggcgaaaagcagtacgtcgcccacatcgtccttggcgccgaaacggacagc
gccgacgctgaaggccgactcatctccgccgcgccagcatacgtggccgcaccctccctc
atgaccatcgagcaggccctcacgccactgatcggaaccatcagccaggtcccgccggct
cattccgccatcaaagtcggtggccaggcgctctaccatcgtgcccgccgcggcgaacag
gtcgaggttccagcccgcaccgtcaccgtccactcgatccgcgttctggcctacgactat
cccgacctgctgctcgccatcgattgcggtaagggcgtctacgtccgcagcatcgcgcgc
gatctcggccgcgcactgggaaccggcgcctacctccacgccctgctccgcaccgctgtc
gggcagttcactctggggcaggcgtggaccgccgcggagattgaagaactccttgagccg
cacacgtggccgctcatggcgctccacccggacgtcgcgctatctcacgctccggcgctc
atcctcgatcgcgacgcggtaaccgcgtggtatcatgggcgaccggtaccaaccggtcgc
cggccgcccgacgcggccgtcgaggcgcgcgtctacgatcaggacggttcctggttgggt
gtggcgacggccgatgccgagcggcgccggtggcgcccacggcaggtcgtggcccattga
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